RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 HOPXQ9BPY8 73 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 PHF7Q9BWX1 381 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 GON7Q9BXV9 100 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 TRIM54Q9BYV2 358 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 HOXD1Q9GZZ0 328 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9□□□□□ -0.97
SNHG3-201ENST00000413987 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9□□□□□ -0.97
SNHG3-201ENST00000413987 MARCH2Q9P0N8 246 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 OR12D3Q9UGF7 316 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 POU2F3Q9UKI9 436 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 FBXW2Q9UKT8 454 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 PPIEQ9UNP9 301 aaKnown RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 GPR55Q9Y2T6 319 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 ST14Q9Y5Y6 855 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 CFAP20Q9Y6A4 193 aaKnown RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 ISPDA4D126 451 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 IQCF5A8MTL0 148 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 BBIP1A8MTZ0 92 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 C5orf67F2Z3F1 127 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 SDHDO14521 159 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 WNT9AO14904 365 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 SMAD9O15198 467 aaKnown RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 UBDO15205 165 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 KMOO15229 486 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 SHOXO15266 292 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 RAD51BO15315 384 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 NRP2O60462 931 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 MMP20O60882 483 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 LRIG2O94898 1065 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 SIX3O95343 332 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 IGFBP1P08833 259 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 ADH6P28332 368 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 RPS9P46781 194 aaKnown RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 SESN2P58004 480 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 SRSF11Q05519 484 aaKnown RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 AGKQ53H12 422 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 CYBRD1Q53TN4 286 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 ARSIQ5FYB1 569 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 CRTC3Q6UUV7 619 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 ZNF687Q8N1G0 1237 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 ELMOD1Q8N336 334 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 FSTL5Q8N475 847 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 NPWQ8N729 165 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 NHLRC2Q8NBF2 726 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 TRPV3Q8NET8 790 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 BPIFB6Q8NFQ5 453 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 OR7G1Q8NGA0 311 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 FBXW5Q969U6 566 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 PSMG2Q969U7 264 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 TMEM186Q96B77 213 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 TCEAL4Q96EI5 215 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 ZNF486Q96H40 463 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 MARK4Q96L34 752 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 FCRL2Q96LA5 508 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 CEP41Q9BYV8 373 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 VCX2Q9H322 139 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 METTL7AQ9H8H3 244 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 IL21Q9HBE4 155 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 IL26Q9NPH9 171 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 PAQR5Q9NXK6 330 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 MPP6Q9NZW5 540 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 SLC9A8Q9Y2E8 581 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 HCFC2Q9Y5Z7 792 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 C2orf92A0A1B0GVN3 265 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 FAM172BPA6NC97 362 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 NOTOA8MTQ0 251 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 GSTA4O15217 222 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ACOX3O15254 700 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 MFSD11O43934 449 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 GPC4O75487 556 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 RBBP9O75884 186 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ZDHHC11BP0C7U3 371 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 SRCP12931 536 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 PKMP14618 531 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 PFKLP17858 780 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 CFL1P23528 166 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 IL32P24001 234 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 GABRR2P28476 465 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 RCVRNP35243 200 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ATP4BP51164 291 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 SMSP52788 366 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 EPHB3P54753 998 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ADARB1P78563 741 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ILF2Q12905 390 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 CLN3Q13286 438 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 E2F2Q14209 437 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 DGUOKQ16854 277 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 NCBP2-AS2Q69YL0 99 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 LCN8Q6JVE9 175 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 SYVN1Q86TM6 617 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 DCP2Q8IU60 420 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 BRIX1Q8TDN6 353 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 CAPSLQ8WWF8 208 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 CELF6Q96J87 481 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 TTYH1Q9H313 450 aaPredicted RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 SMURF1Q9HCE7 757 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 PRMT8Q9NR22 394 aaPredicted RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 FBXO8Q9NRD0 319 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 CATSPERZQ9NTU4 200 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 KCND3Q9UK17 655 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms