RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ADH1BP00325 375 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 ZNF8P17098 575 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 TRAM2Q15035 370 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 CEP97Q8IW35 865 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 PROKR2Q8NFJ6 384 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 SCRN2Q96FV2 425 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 LRIG1Q96JA1 1093 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 CD180Q99467 661 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 CCDC86Q9H6F5 360 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 ZNF623O75123 536 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 BEST1O76090 585 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 PFKMP08237 780 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 PRKACGP22612 351 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 ELK4P28324 431 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 C1orf216Q8TAB5 229 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 TCTEX1D2Q8WW35 142 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 L3HYPDHQ96EM0 354 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 TBL1XR1Q9BZK7 514 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 Q9N2J8 555 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 ELOVL2Q9NXB9 296 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 ADAMTS6Q9UKP5 1117 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 NDRG2Q9UN36 371 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 FARSAQ9Y285 508 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 NAV1Q8NEY1 1877 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 ZNF705EA8MWA4 302 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 OR1I1O60431 355 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 S100A10P60903 97 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 SOX4Q06945 474 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 GALNT1Q10472 559 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 ZNF627Q7L945 461 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 SDR16C5Q8N3Y7 309 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 OR5P2Q8WZ92 322 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 RHBDF1Q96CC6 855 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 PDLIM7Q9NR12 457 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 KCNIP3Q9Y2W7 256 aa13.23□□□□□ -0.29
SMARCA4-202ENST00000413806 A0A1W2PRQ8 180 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 TLX2O43763 284 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 HNF1BP35680 557 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 MLLT3P42568 568 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 GRB7Q14451 532 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 TEAD2Q15562 447 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 BLOC1S3Q6QNY0 202 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 SSX6Q7RTT6 188 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 SERINC5Q86VE9 423 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 SLC7A6OSQ96CW6 309 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 RGCCQ9H4X1 137 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 BEX1Q9HBH7 125 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 SERINC1Q9NRX5 453 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 DLGAP4Q9Y2H0 992 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 PCDHGB6Q9Y5F9 930 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 PGAM2P15259 253 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 ZNF20P17024 532 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 HK1P19367 917 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 RORAP35398 523 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 RPS3AP61247 264 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 TMEM115Q12893 351 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 DLK2Q6UY11 383 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 LHFPL3Q86UP9 236 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 SLC15A4Q8N697 577 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 TCEAL3Q969E4 200 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 NKD1Q969G9 470 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 CCDC120Q96HB5 630 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 KXD1Q9BQD3 176 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 ACTL8Q9H568 366 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 ACSL5Q9ULC5 683 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 MYH6P13533 1939 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 INPPL1O15357 1258 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 DIRAS1O95057 198 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 CSN2P05814 226 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 GABARAPL2P60520 117 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 VLDLRP98155 873 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 NFE2L1Q14494 772 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 TCEAL6Q6IPX3 200 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 ARL9Q6T311 187 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 GPRIN1Q7Z2K8 1008 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 GALNT11Q8NCW6 608 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 THRSPQ92748 146 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 IGSF8Q969P0 613 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 TMED9Q9BVK6 235 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 ABI3Q9P2A4 366 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 CLCA3PQ9Y6N3 262 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 SMAD9O15198 467 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 PDYNP01213 254 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 NUDT7P0C024 238 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 GJA1P17302 382 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 DNASE1P24855 282 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 GGT5P36269 586 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 MC1RQ01726 317 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 PRKCDQ05655 676 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 ZNF252P-AS1Q0IIN9 211 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 PPP1R8Q12972 351 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 FAM189A2Q15884 450 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 ASRGL1Q7L266 308 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 CHERPQ8IWX8 916 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 METTL25Q8N6Q8 603 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 IGSF21Q96ID5 467 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 NSUN5Q96P11 429 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms