RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 SLC22A9Q8IVM8 553 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 SCUBE1Q8IWY4 988 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 C4orf33Q8N1A6 199 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 RIBC1Q8N443 379 aaPredicted RBP9.46□□□□□ -0.9
TMEM248-202ENST00000413593 RBMXL3Q8N7X1 1067 aaKnown RBP9.46□□□□□ -0.9
TMEM248-202ENST00000413593 FAM47BQ8NA70 645 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 TMEM52Q8NDY8 209 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 BRIX1Q8TDN6 353 aaKnown RBP9.46□□□□□ -0.9
TMEM248-202ENST00000413593 TRPC4APQ8TEL6 797 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 PPP4R1Q8TF05 950 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 TM9SF4Q92544 642 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 RGMAQ96B86 450 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 L3HYPDHQ96EM0 354 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 MAGEB10Q96LZ2 347 aaPredicted RBP9.46□□□□□ -0.9
TMEM248-202ENST00000413593 FRG2BQ96QU4 278 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 CSF3RQ99062 836 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 LPAR4Q99677 370 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 CENPKQ9BS16 269 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 SORBS1Q9BX66 1292 aaKnown RBP9.46□□□□□ -0.9
TMEM248-202ENST00000413593 ROPN1BQ9BZX4 212 aaPredicted RBP9.46□□□□□ -0.9
TMEM248-202ENST00000413593 ROPN1Q9HAT0 212 aaPredicted RBP9.46□□□□□ -0.9
TMEM248-202ENST00000413593 LYRM4Q9HD34 91 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 NECTIN3Q9NQS3 549 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 PSD3Q9NYI0 1048 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 KCMF1Q9P0J7 381 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 LGALS13Q9UHV8 139 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 ZNF225Q9UK10 706 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 GRID1Q9ULK0 1009 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 PPT2Q9UMR5 302 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 MMACHCQ9Y4U1 282 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 CLDN16Q9Y5I7 305 aa9.46□□□□□ -0.9
TMEM248-202ENST00000413593 HELZ2Q9BYK8 2649 aaKnown RBP9.45□□□□□ -0.9
TMEM248-202ENST00000413593 TGFBR3LH3BV60 316 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 CLDN4O14493 209 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 PLPP1O14494 284 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 COPEO14579 308 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 SORBS2O94875 1100 aaKnown RBP9.45□□□□□ -0.9
TMEM248-202ENST00000413593 TUBBP07437 444 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 MYL2P10916 166 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ITGAMP11215 1152 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 RAP1GDS1P52306 607 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 AP2B1P63010 937 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ACTN3Q08043 901 aaPredicted RBP9.45□□□□□ -0.9
TMEM248-202ENST00000413593 MFAP5Q13361 173 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 EXT1Q16394 746 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 BTBD16Q32M84 506 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 CCDC153Q494R4 210 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 SLC6A19Q695T7 634 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 TTC19Q6DKK2 380 aaPredicted RBP9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ISLR2Q6UXK2 745 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ZYG11AQ6WRX3 759 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 TRABD2AQ86V40 505 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ZNF595Q8IYB9 648 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ZADH2Q8N4Q0 377 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 SIRT6Q8N6T7 355 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ARMC2Q8NEN0 867 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 PNPLA2Q96AD5 504 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 MTFMTQ96DP5 389 aaKnown RBP9.45□□□□□ -0.9
TMEM248-202ENST00000413593 LMF1Q96S06 567 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ZNF382Q96SR6 550 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 SERPINI1Q99574 410 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 MAPKAP1Q9BPZ7 522 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 TMEM109Q9BVC6 243 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ZNF717Q9BY31 904 aaPredicted RBP9.45□□□□□ -0.9
TMEM248-202ENST00000413593 C12orf65Q9H3J6 166 aaKnown RBP9.45□□□□□ -0.9
TMEM248-202ENST00000413593 ELOVL6Q9H5J4 265 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 PRTFDC1Q9NRG1 225 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 PTGFRNQ9P2B2 879 aa9.45□□□□□ -0.9
TMEM248-202ENST00000413593 MRPS33Q9Y291 106 aaKnown RBP9.45□□□□□ -0.9
TMEM248-202ENST00000413593 J3QKU1 62 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 CTNSO60931 367 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 EEDO75530 441 aaKnown RBP9.44□□□□□ -0.9
TMEM248-202ENST00000413593 OR4F21O95013 312 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 SEMA3DO95025 777 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 BSGP35613 385 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 SLC26A5P58743 744 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 LCP2Q13094 533 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 IFT88Q13099 833 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 SLC13A2Q13183 592 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 SLAMF1Q13291 335 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 SGO1Q5FBB7 561 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 FAM219BQ5XKK7 198 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 B3GNTL1Q67FW5 361 aaPredicted RBP9.44□□□□□ -0.9
TMEM248-202ENST00000413593 LINC00696Q6ZRV3 163 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 Q6ZS92 163 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 GPRIN3Q6ZVF9 776 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 CLNKQ7Z7G1 428 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 NUDT13Q86X67 352 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 ZCCHC7Q8N3Z6 543 aaKnown RBP9.44□□□□□ -0.9
TMEM248-202ENST00000413593 CCNYL1Q8N7R7 359 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 CDYL2Q8N8U2 506 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 Q8NA96 180 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 MYRIPQ8NFW9 859 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 RDH11Q8TC12 318 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 M1APQ8TC57 530 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 CCDC126Q96EE4 140 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 APOPT1Q96IL0 206 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 TRIM4Q9C037 500 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 GSTO2Q9H4Y5 243 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 EPS8L2Q9H6S3 715 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms