RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 KCMF1Q9P0J7 381 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 FBXW2Q9UKT8 454 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 KCNMB2Q9Y691 235 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 CELSR3Q9NYQ7 3312 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 KMT2BQ9UMN6 2715 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-206ENST00000412056 TMEM233B4DJY2 109 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 AZIN1O14977 448 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 ITM2AO43736 263 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 TMPRSS11DO60235 418 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 LYPLA1O75608 230 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-206ENST00000412056 DNAJB5O75953 348 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 GBAP04062 536 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 ITGB2P05107 769 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 UROSP10746 265 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 ACPPP15309 386 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 BGNP21810 368 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 JAK1P23458 1154 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 SERPINB5P36952 375 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 TSFMP43897 325 aaKnown RBP13.13□□□□□ -0.31
CPNE1-206ENST00000412056 BTG2P78543 158 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 HMGCS1Q01581 520 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 ZNF33BQ06732 778 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 GALNT1Q10472 559 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-206ENST00000412056 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 LINC00303Q3SY05 128 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 BORAQ6PGQ7 559 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 NUDT13Q86X67 352 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 METTL4Q8N3J2 472 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 ZCCHC7Q8N3Z6 543 aaKnown RBP13.13□□□□□ -0.31
CPNE1-206ENST00000412056 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 OR11G2Q8NGC1 345 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 AGR3Q8TD06 166 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 ADAMTS18Q8TE60 1221 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 IP6K3Q96PC2 410 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 DDX31Q9H8H2 851 aaKnown RBP13.13□□□□□ -0.31
CPNE1-206ENST00000412056 LYRM4Q9HD34 91 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 FBXL4Q9UKA2 621 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 PTGDR2Q9Y5Y4 395 aa13.13□□□□□ -0.31
CPNE1-206ENST00000412056 SERTM1A2A2V5 107 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 TMEM114B3SHH9 223 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 CYR61O00622 381 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 PEX12O00623 359 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 CYC1P08574 325 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 C8orf89P0DMQ9 161 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 NEFHP12036 1026 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 MAOAP21397 527 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 CPN2P22792 545 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 TPP2P29144 1249 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-206ENST00000412056 SLC18A1P54219 525 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 TBL3Q12788 808 aaKnown RBP13.12□□□□□ -0.31
CPNE1-206ENST00000412056 SH2D4BQ5SQS7 431 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 KANK2Q63ZY3 851 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 MRM1Q6IN84 353 aaKnown RBP13.12□□□□□ -0.31
CPNE1-206ENST00000412056 TMEM205Q6UW68 189 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 QSOX2Q6ZRP7 698 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 MED25Q71SY5 747 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 COMMD6Q7Z4G1 85 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 ANKRD37Q7Z713 158 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 C1orf52Q8N6N3 182 aaKnown RBP13.12□□□□□ -0.31
CPNE1-206ENST00000412056 PLPP5Q8NEB5 264 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 APOBEC4Q8WW27 367 aaKnown RBP13.12□□□□□ -0.31
CPNE1-206ENST00000412056 NACC2Q96BF6 587 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 ING2Q9H160 280 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 ZNF395Q9H8N7 513 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-206ENST00000412056 EML4Q9HC35 981 aaKnown RBP13.12□□□□□ -0.31
CPNE1-206ENST00000412056 NECTIN3Q9NQS3 549 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 PRTFDC1Q9NRG1 225 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 AHSPQ9NZD4 102 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 VPS29Q9UBQ0 182 aa13.12□□□□□ -0.31
CPNE1-206ENST00000412056 LOC102723996A0A087X1L8 192 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 IGKV3D-11A0A0A0MRZ8 115 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 IGHV3-20A0A0C4DH32 117 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 HMGB1P1B2RPK0 211 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-206ENST00000412056 TGFBR3LH3BV60 316 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 PRMT3O60678 531 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 PRKRAO75569 313 aaKnown RBP13.11□□□□□ -0.31
CPNE1-206ENST00000412056 HSPA4LO95757 839 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 KLK1P06870 262 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 FAM58BPP0C7Q3 252 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 COX6A1P12074 109 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 RRADP55042 308 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 ABCE1P61221 599 aaKnown RBP13.11□□□□□ -0.31
CPNE1-206ENST00000412056 BTKQ06187 659 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 PCOLCEQ15113 449 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 IMPG1Q17R60 797 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 DCAF10Q5QP82 559 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 C18orf63Q68DL7 685 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 CYP20A1Q6UW02 462 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 PCSK4Q6UW60 755 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 CLNKQ7Z7G1 428 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 APLFQ8IW19 511 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-206ENST00000412056 SCUBE1Q8IWY4 988 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 AMER2Q8N7J2 671 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 GBP7Q8N8V2 638 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-206ENST00000412056 TMEM102Q8N9M5 508 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-206ENST00000412056 CHTF18Q8WVB6 975 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 METTL21AQ8WXB1 218 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms