RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ZNF717Q9BY31 904 aaPredicted RBP16.06■□□□□ 0.16
NUP50-203ENST00000407019 ZNF556Q9HAH1 456 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 WASH6PQ9NQA3 447 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 PRSS16Q9NQE7 514 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 PLCXD1Q9NUJ7 323 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 SPATA7Q9P0W8 599 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 PSORS1C1Q9UIG5 152 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 WBP11Q9Y2W2 641 aaKnown RBP16.06■□□□□ 0.16
NUP50-203ENST00000407019 FAM32AQ9Y421 112 aaKnown RBP16.06■□□□□ 0.16
NUP50-203ENST00000407019 CFAP20Q9Y6A4 193 aaKnown RBP16.06■□□□□ 0.16
NUP50-203ENST00000407019 TRBC2A0A5B9 178 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 CBFA2T3O75081 653 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 TBX6O95947 436 aaPredicted RBP16.06■□□□□ 0.16
NUP50-203ENST00000407019 LCKP06239 509 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 EPHX1P07099 455 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 VBP1P61758 197 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 LSM3P62310 102 aaKnown RBP16.06■□□□□ 0.16
NUP50-203ENST00000407019 PIP5KL1Q5T9C9 394 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 MLIPQ5VWP3 458 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 LINC00299Q6ZSB3 139 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 PAGE2Q7Z2X7 111 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 IGFN1Q86VF2 1251 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 ADGRF3Q8IZF5 1079 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 DEPDC4Q8N2C3 294 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 NATD1Q8N6N6 113 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 ANKRD53Q8N9V6 530 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 OR5P2Q8WZ92 322 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 HERVK_113Q902F9 699 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 VMP1Q96GC9 406 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 F2RL3Q96RI0 385 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 HMG20AQ9NP66 347 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 ZDHHC4Q9NPG8 344 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 CUEDC1Q9NWM3 386 aaPredicted RBP16.06■□□□□ 0.16
NUP50-203ENST00000407019 SH3GLB1Q9Y371 365 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 ENPP4Q9Y6X5 453 aa16.06■□□□□ 0.16
NUP50-203ENST00000407019 DENND4AQ7Z401 1863 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 RTCAO00442 366 aaKnown RBP16.05■□□□□ 0.16
NUP50-203ENST00000407019 CAPN5O15484 640 aaPredicted RBP16.05■□□□□ 0.16
NUP50-203ENST00000407019 TBX19O60806 448 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 SERPINB1P30740 379 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 BSGP35613 385 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 TGFBR2P37173 567 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 SERPINB10P48595 397 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 IDH2P48735 452 aaKnown RBP16.05■□□□□ 0.16
NUP50-203ENST00000407019 CCR8P51685 355 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 REEP5Q00765 189 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 REEP3Q6NUK4 255 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 FAM180BQ6P0A1 224 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 FBXO46Q6PJ61 603 aaPredicted RBP16.05■□□□□ 0.16
NUP50-203ENST00000407019 DCDC5Q6ZRR9 648 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 ADGRD2Q7Z7M1 963 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 ZNF605Q86T29 641 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 ZNF554Q86TJ5 538 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 OR9Q2Q8NGE9 314 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 RHOXF1Q8NHV9 184 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 MYDGFQ969H8 173 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 TM4SF18Q96CE8 201 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 NRTNQ99748 197 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 PSD2Q9BQI7 771 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 ITPAQ9BY32 194 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 WDR12Q9GZL7 423 aaKnown RBP16.05■□□□□ 0.16
NUP50-203ENST00000407019 PCBD2Q9H0N5 130 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 TM7SF3Q9NS93 570 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 ACER3Q9NUN7 267 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 ERGIC3Q9Y282 383 aa16.05■□□□□ 0.16
NUP50-203ENST00000407019 IGLON5A6NGN9 336 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 PDPK1O15530 556 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 CCNB2O95067 398 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 GADD45GO95257 159 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 CD36P16671 472 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 DDX5P17844 614 aaKnown RBP16.04■□□□□ 0.16
NUP50-203ENST00000407019 RHCEP18577 417 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 IDUAP35475 653 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 LIMS1P48059 325 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 ALDH9A1P49189 494 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 TEKQ02763 1124 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 PDGFRLQ15198 375 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 FAM46CQ5VWP2 391 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 METRNLQ641Q3 311 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 SAXO2Q658L1 398 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 CEACAM20Q6UY09 585 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 ADCK1Q86TW2 530 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 CENPSQ8N2Z9 138 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 DNAJC22Q8N4W6 341 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 SNRNP27Q8WVK2 155 aaKnown RBP16.04■□□□□ 0.16
NUP50-203ENST00000407019 S100ZQ8WXG8 99 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 SMPDL3AQ92484 453 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 NEURL3Q96EH8 262 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 PDXPQ96GD0 296 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 QRFPRQ96P65 431 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 LGR4Q9BXB1 951 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 AKIP1Q9NQ31 210 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 HCN4Q9Y3Q4 1203 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 DNMT3AQ9Y6K1 912 aaPredicted RBP16.04■□□□□ 0.16
NUP50-203ENST00000407019 MYO7AQ13402 2215 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 CLDN24A6NM45 220 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 TOR1BO14657 336 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 PCDH17O14917 1159 aa16.04■□□□□ 0.16
NUP50-203ENST00000407019 NADKO95544 446 aaPredicted RBP16.04■□□□□ 0.16
NUP50-203ENST00000407019 IFNW1P05000 195 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms