RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 NME4O00746 187 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 B3GALT2O43825 422 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 DNAJB6O75190 326 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 C6orf47O95873 294 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 C8orf89P0DMQ9 161 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PCSK2P16519 638 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ME2P23368 584 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PTGER1P34995 402 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 CASP9P55211 416 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 CCL7P80098 99 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SELPLGQ14242 412 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 FLOT2Q14254 428 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 GPR19Q15760 415 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 PIGGQ5H8A4 983 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SAMD4BQ5PRF9 694 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 C18orf63Q68DL7 685 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 HACD2Q6Y1H2 254 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 IKBIPQ70UQ0 350 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SZRD1Q7Z422 152 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SHISA5Q8N114 240 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 DPP10Q8N608 796 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 OR5T3Q8NGG3 340 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 OR4A15Q8NGL6 344 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 IFI44Q8TCB0 444 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 NT5CQ8TCD5 201 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 RHBDD1Q8TEB9 315 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ECSITQ9BQ95 431 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 GPATCH1Q9BRR8 931 aaKnown RBP3.52□□□□□ -1.85
RTN4-208ENST00000404909 FAIM2Q9BWQ8 316 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 SERHLQ9NQF3 203 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 TMEM181Q9P2C4 612 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 EPHA6Q9UF33 1036 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 EGFL7Q9UHF1 273 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 ADAM29Q9UKF5 820 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 UTS2RQ9UKP6 389 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 POMPQ9Y244 141 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 KLK4Q9Y5K2 254 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 U3KQA8 63 aa3.52□□□□□ -1.85
RTN4-208ENST00000404909 RALGAPA1Q6GYQ0 2036 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 FAM186AA6NE01 2351 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 A0A0A6YYC8 382 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 A0A1W2PQM1 296 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 A0A1W2PR48 441 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 I3L1I5 382 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 PGRMC2O15173 223 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PCDHGA12O60330 932 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 SRPX2O60687 465 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 DNAJA2O60884 412 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 AIFM1O95831 613 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ZNF10P21506 573 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 ALAS2P22557 587 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 SOAT1P35610 550 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 RPL3P39023 403 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 MANFP55145 182 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 WNT3P56703 355 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 HBA1P69905 142 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 HSD11B2P80365 405 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 MS4A2Q01362 244 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 LIPEQ05469 1076 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 HSPB3Q12988 150 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PRSS53Q2L4Q9 553 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ANXA8L1Q5VT79 327 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PRAMEF17Q5VTA0 474 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 TMEM214Q6NUQ4 689 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 PRMT9Q6P2P2 845 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PGM2L1Q6PCE3 622 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 CYP2R1Q6VVX0 501 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 TMPRSS9Q7Z410 1059 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 DNAJC22Q8N4W6 341 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 FAM47BQ8NA70 645 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 OR6C4Q8NGE1 309 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 OR9A4Q8NGU2 314 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 OR10A6Q8NH74 314 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 OR5AK3PQ8NH89 298 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 NAT6Q93015 286 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 STMN2Q93045 179 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 COQ8BQ96D53 544 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 LOXL4Q96JB6 756 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ANKRD27Q96NW4 1050 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 CD180Q99467 661 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 KCTD14Q9BQ13 255 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 COL25A1Q9BXS0 654 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 SPRTNQ9H040 489 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 KCNH6Q9H252 994 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 EPB41L1Q9H4G0 881 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ALG2Q9H553 416 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 IKZF5Q9H5V7 419 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ANKHQ9HCJ1 492 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 RXFP3Q9NSD7 469 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 FAM120CQ9NX05 1096 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 SLC25A37Q9NYZ2 338 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 NDOR1Q9UHB4 597 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ATP6V1HQ9UI12 483 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PLCL2Q9UPR0 1127 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 USP22Q9UPT9 525 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 MAPRE3Q9UPY8 281 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ERVK-11Q9UQG0 969 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PCDHGA5Q9Y5G8 931 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 AHCTF1Q8WYP5 2266 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 A0A096LPI6 279 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms