RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 ENTPD4Q9Y227 616 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 ENPP4Q9Y6X5 453 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 FOCADQ5VW36 1801 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 CH25HO95992 272 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 DNASE1P24855 282 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 WEE1P30291 646 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 OR1D2P34982 312 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 LARS2Q15031 903 aaKnown RBP13.4□□□□□ -0.26
HMGA2-204ENST00000403681 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 LHFPL3Q86UP9 236 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 RFT1Q96AA3 541 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 LRR1Q96L50 414 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 HDHD5Q9BXW7 423 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 VNN3Q9NY84 501 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 SRRDQ9UH36 339 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 UBQLN2Q9UHD9 624 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 A0A075B6Q4 140 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 M0R233 179 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 MEN1O00255 615 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 TOXO94900 526 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 MAZP56270 477 aaKnown RBP13.4□□□□□ -0.26
HMGA2-204ENST00000403681 TAS2R50P59544 299 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 TBX5Q99593 518 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 GSDMCQ9BYG8 508 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 NMNAT1Q9HAN9 279 aaPredicted RBP13.4□□□□□ -0.26
HMGA2-204ENST00000403681 TMEM30AQ9NV96 361 aa13.4□□□□□ -0.26
HMGA2-204ENST00000403681 RGS17Q9UGC6 210 aaPredicted RBP13.4□□□□□ -0.26
HMGA2-204ENST00000403681 FBXO9Q9UK97 447 aaPredicted RBP13.4□□□□□ -0.26
HMGA2-204ENST00000403681 CHURC1-FNTBB4DL54 471 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 KLK1P06870 262 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 HOXC13P31276 330 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 CDH11P55287 796 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 GMFBP60983 142 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 TESCQ96BS2 214 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 MRPL48Q96GC5 212 aaKnown RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 OR51B5Q9H339 312 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 AKAP7Q9P0M2 348 aaPredicted RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 IL17CQ9P0M4 197 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 SHROOM3Q8TF72 1996 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 CDK5RAP2Q96SN8 1893 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 SLC38A8A6NNN8 435 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 HHLA1C9JL84 531 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 ARHGEF15O94989 841 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 KCNK5O95279 499 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 PRR35P0CG20 571 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 JUPP14923 745 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 PRKCAP17252 672 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 RGRP47804 291 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 SLBPQ14493 270 aaKnown RBP eCLIP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 AGTRAPQ6RW13 159 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 CHPFQ8IZ52 775 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 SPERTQ8NA61 448 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 RAB8BQ92930 207 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 REEP4Q9H6H4 257 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 PGAP2Q9UHJ9 254 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 SLC35F4A4IF30 521 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 EFCAB14O75071 495 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 RFPL3O75679 317 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 SRPRAP08240 638 aaKnown RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 HOXD8P13378 290 aaPredicted RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 STARP49675 285 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 BCL2L15Q5TBC7 163 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 ADNP2Q6IQ32 1131 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 VN1R5Q7Z5H4 357 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 OR6F1Q8NGZ6 308 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 TMEM169Q96HH4 297 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 NUP214P35658 2090 aaPredicted RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 ATG13O75143 517 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 PRSS23O95084 383 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 GKP32189 559 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 RPS19P39019 145 aaKnown RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 CSKP41240 450 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 AVPR1BP47901 424 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 PNLIPRP1P54315 467 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 ZDHHC20Q5W0Z9 365 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 SAMD12Q8N8I0 201 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 PIGXQ8TBF5 258 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 USP7Q93009 1102 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 TIFAQ96CG3 184 aa13.39□□□□□ -0.27
HMGA2-204ENST00000403681 GPN1Q9HCN4 374 aaPredicted RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 PPIEQ9UNP9 301 aaKnown RBP13.39□□□□□ -0.27
HMGA2-204ENST00000403681 TRIP11Q15643 1979 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 LOC102723532A0A0G2JNH3 316 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 A0A0U1RQF3 1178 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 SYN3O14994 580 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 EEF1E1O43324 174 aaKnown RBP13.38□□□□□ -0.27
HMGA2-204ENST00000403681 ADAP00813 363 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 RLN1P04808 185 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 CXCR2P25025 360 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 PCGF2P35227 344 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 SLC19A1P41440 591 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 RING1Q06587 406 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 ZNF763Q0D2J5 394 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 SF1Q15637 639 aaKnown RBP13.38□□□□□ -0.27
HMGA2-204ENST00000403681 ARL9Q6T311 187 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms