RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PIGAP37287 484 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SLC1A2P43004 574 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MAN2A2P49641 1150 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CCR8P51685 355 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZNF136P52737 540 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NKX6-1P78426 367 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 DHX9Q08211 1270 aaKnown RBP10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 POU4F3Q15319 338 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TERF2Q15554 542 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TTLL9Q3SXZ7 439 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NDUFAF5Q5TEU4 345 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ANKRD22Q5VYY1 191 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 UGT3A1Q6NUS8 523 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 STRA8Q7Z7C7 330 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CAND1Q86VP6 1230 aaKnown RBP10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SLC13A5Q86YT5 568 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 OR56A3Q8NH54 315 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PTPMT1Q8WUK0 201 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ASB15Q8WXK1 588 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NEIL2Q969S2 332 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SNF8Q96H20 258 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PANX2Q96RD6 677 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 FAM173AQ9BQD7 235 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 FAM129AQ9BZQ8 928 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PCBD2Q9H0N5 130 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SLC6A15Q9H2J7 730 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZNF395Q9H8N7 513 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 INTS10Q9NVR2 710 aaKnown RBP10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZFP69BQ9UJL9 534 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CAPN6Q9Y6Q1 641 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PRR14LQ5THK1 2151 aa10.98□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TRGV5A0A0B4J1U4 118 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 LRRC3CA6NJW4 275 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CYLC1P35663 651 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 KCNJ1P48048 391 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ASCL1P50553 236 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 AGFG1P52594 562 aaKnown RBP10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TERF1P54274 439 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 BASP1P80723 227 aaKnown RBP10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 REEP5Q00765 189 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SLC10A1Q14973 349 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PCBP2Q15366 365 aaKnown RBP eCLIP10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 WLSQ5T9L3 541 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 LYPD8Q6UX82 237 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CLNKQ7Z7G1 428 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 GPALPP1Q8IXQ4 340 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 UBL4BQ8N7F7 174 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CSF3RQ99062 836 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NDNQ99608 321 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PARVBQ9HBI1 364 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NEUROD4Q9HD90 331 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 B4GALT7Q9UBV7 327 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MMACHCQ9Y4U1 282 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HEATR5AQ86XA9 2040 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MED12LQ86YW9 2145 aa10.97□□□□□ -0.65
SPTLC1P3-201ENST00000403408 DSCAMO60469 2012 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MIF4GDA9UHW6 222 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 GABRB3P28472 473 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HNRNPH1P31943 449 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 GRK3P35626 688 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CDKN2DP55273 166 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 BTN3A2P78410 334 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ACSF3Q4G176 576 aaPredicted RBP10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TOR1AIP1Q5JTV8 583 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HECTD2Q5U5R9 776 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PAQR3Q6TCH7 311 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RTL4Q6ZR62 310 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 GK5Q6ZS86 529 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 FAM47EQ6ZV65 393 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ABHD13Q7L211 337 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CCDC89Q8N998 374 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RNF214Q8ND24 703 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SARAFQ96BY9 339 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CALR3Q96L12 384 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TSNARE1Q96NA8 513 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 QRFPRQ96P65 431 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 WDR83Q9BRX9 315 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 EPB41L4BQ9H329 900 aa10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZNF703Q9H7S9 590 aaPredicted RBP10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 BEX4Q9NWD9 120 aaPredicted RBP10.96□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CHD3Q12873 2000 aaKnown RBP10.96□□□□□ -0.66
SPTLC1P3-201ENST00000403408 CTAGE9A4FU28 777 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 TRIM64A6NGJ6 449 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 TRIM64BA6NI03 449 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 CLCA1A8K7I4 914 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 HSPB2A8KAH6 182 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 PSMD12O00232 456 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 CYR61O00622 381 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 SIAH2O43255 324 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 HCN1O60741 890 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 LRATO95237 230 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 TPSB2P20231 275 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 AHRP35869 848 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 TRPC1P48995 793 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 RGS1Q08116 209 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 DHX34Q14147 1143 aaKnown RBP10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 TPSAB1Q15661 275 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 HSPB2Q16082 182 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 Q5PR19 223 aa10.95□□□□□ -0.66
SPTLC1P3-201ENST00000403408 RBM20Q5T481 1227 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms