RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 RAB8BQ92930 207 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 TMEM168Q9H0V1 697 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 MRPL15Q9P015 296 aaKnown RBP8.33□□□□□ -1.08
CTNND1-205ENST00000399050 DNAJC15Q9Y5T4 150 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 KMOO15229 486 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 TLL1O43897 1013 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 PRAMEF11O60813 436 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 EPHX1P07099 455 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 CLUP10909 449 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 RPL17P18621 184 aaKnown RBP8.33□□□□□ -1.08
CTNND1-205ENST00000399050 UQCRC1P31930 480 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 KDELR2P33947 212 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 WASP42768 502 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 RGS19P49795 217 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 MLLT6P55198 1093 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-205ENST00000399050 ZNF763Q0D2J5 394 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 TRAM2Q15035 370 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 TMCO2Q7Z6W1 182 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-205ENST00000399050 LHFPL3Q86UP9 236 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 SPARTQ8N0X7 666 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 SYNPOQ8N3V7 929 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 HDDC3Q8N4P3 179 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 CASTOR1Q8WTX7 329 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 NR4A3Q92570 626 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 ACTR6Q9GZN1 396 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 SRMSQ9H3Y6 488 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 IGSF5Q9NSI5 407 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 TAC3Q9UHF0 121 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 RIMS3Q9UJD0 308 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 INTS6Q9UL03 887 aaKnown RBP8.33□□□□□ -1.08
CTNND1-205ENST00000399050 PCDHGB5Q9Y5G0 923 aa8.33□□□□□ -1.08
CTNND1-205ENST00000399050 A0A1W2PPK0 400 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 B4GAT1O43505 415 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 BCKDHAP12694 445 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ALAS2P22557 587 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 EDNRBP24530 442 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 MAPK3P27361 379 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 RPL10P27635 214 aaKnown RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 CAP1Q01518 475 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 PON3Q15166 354 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 RAB6CQ53S08 254 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 PLPP4Q5VZY2 271 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 NUP54Q7Z3B4 507 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 UBQLNLQ8IYU4 475 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 FBXO22Q8NEZ5 403 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 NETO1Q8TDF5 533 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 MAFIPQ8WZ33 124 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 SLC25A36Q96CQ1 311 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 DHRS4Q9BTZ2 278 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 RAB6CQ9H0N0 254 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 MTG2Q9H4K7 406 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 NUFIP1Q9UHK0 495 aaKnown RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 IFT52Q9Y366 437 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ZNF705EA8MWA4 302 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ZNF878C9JN71 531 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ERI3O43414 337 aaKnown RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 HOXD8P13378 290 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 GTF2F2P13984 249 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 CDKL4Q5MAI5 379 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 IRAK1BP1Q5VVH5 260 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 C14orf80Q86SX3 495 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 SLC22A15Q8IZD6 547 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 OR4K3Q96R72 315 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 SLC30A3Q99726 388 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ARL6Q9H0F7 186 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 XYLT2Q9H1B5 865 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ABCG5Q9H222 651 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ATPIF1Q9UII2 106 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 SCP2D1Q9UJQ7 156 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 PCDHB11Q9Y5F2 797 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 SOBPA7XYQ1 873 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 VILLO15195 856 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 VNN2O95498 520 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 C8orf89P0DMQ9 161 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 SERINC3Q13530 473 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 LRRC32Q14392 662 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 BCL2L15Q5TBC7 163 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 AGTRAPQ6RW13 159 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ZFP41Q8N8Y5 198 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 CHDHQ8NE62 594 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 SLC5A11Q8WWX8 675 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 PMEPA1Q969W9 287 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ZNF700Q9H0M5 742 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 WDR6Q9NNW5 1121 aaKnown RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 GKN1Q9NS71 199 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 GSKIPQ9P0R6 139 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 PLAGL1Q9UM63 463 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 PADI2Q9Y2J8 665 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 A0A1W2PQL4 384 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 AGAP5A6NIR3 686 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 CAPN3P20807 821 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 CD47Q08722 323 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 PYHIN1Q6K0P9 492 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 SLC27A4Q6P1M0 643 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 DUS1LQ6P1R4 473 aaKnown RBP8.32□□□□□ -1.08
CTNND1-205ENST00000399050 BAIAP2L2Q6UXY1 529 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 ZNF101Q8IZC7 436 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 HS3ST5Q8IZT8 346 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 OR56A1Q8NGH5 318 aa8.32□□□□□ -1.08
CTNND1-205ENST00000399050 OR14C36Q8NHC7 312 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms