RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 VSTM2BA6NLU5 285 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 BMP10O95393 424 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 FAM58BPP0C7Q3 252 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 TIA1P31483 386 aaKnown RBP eCLIP20.12■□□□□ 0.812e-15■■■■□ 23.3
FXN-202ENST00000396364 UCNP55089 124 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 LIM2P55344 173 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 COL9A2Q14055 689 aaPredicted RBP20.12■□□□□ 0.81
FXN-202ENST00000396364 SYT16Q17RD7 645 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 SMU1Q2TAY7 513 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 TUBB8Q3ZCM7 444 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 GALNTL6Q49A17 601 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 MINDY4Q4G0A6 757 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 LCN10Q6JVE6 187 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 GALNT18Q6P9A2 607 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 Q6ZSR9 355 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 FAM47EQ6ZV65 393 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 PROSER1Q86XN7 944 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 OR2Y1Q8NGV0 311 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 NACC2Q96BF6 587 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 APIPQ96GX9 242 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 DCBLD2Q96PD2 775 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 SIKE1Q9BRV8 207 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 FAIM2Q9BWQ8 316 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 ZNF717Q9BY31 904 aaPredicted RBP20.12■□□□□ 0.81
FXN-202ENST00000396364 NUF2Q9BZD4 464 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 MEAF6Q9HAF1 191 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 SLCO1B3Q9NPD5 702 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 FBXW2Q9UKT8 454 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 TCFL5Q9UL49 500 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 CEP295Q9C0D2 2601 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 AHCTF1Q8WYP5 2266 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 AKAP13Q12802 2813 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 LSM1O15116 133 aaKnown RBP20.11■□□□□ 0.81
FXN-202ENST00000396364 EEDO75530 441 aaKnown RBP20.11■□□□□ 0.81
FXN-202ENST00000396364 TGDSO95455 350 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 RECKO95980 971 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 HEXBP07686 556 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 VIMP08670 466 aaKnown RBP20.11■□□□□ 0.81
FXN-202ENST00000396364 ANXA4P09525 319 aaPredicted RBP20.11■□□□□ 0.81
FXN-202ENST00000396364 LIFP15018 202 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 PCSK2P16519 638 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 PPP2R1BP30154 601 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 RPL38P63173 70 aaKnown RBP20.11■□□□□ 0.81
FXN-202ENST00000396364 RUNX2Q13950 521 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 VWA2Q5GFL6 755 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 MED25Q71SY5 747 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 ZNF595Q8IYB9 648 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 METTL21AQ8WXB1 218 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 SLC45A3Q96JT2 553 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 CRB3Q9BUF7 120 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 SORBS1Q9BX66 1292 aaKnown RBP20.11■□□□□ 0.81
FXN-202ENST00000396364 ACTL8Q9H568 366 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 SEMA3GQ9NS98 782 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 CCL27Q9Y4X3 112 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 PTGDR2Q9Y5Y4 395 aa20.11■□□□□ 0.81
FXN-202ENST00000396364 ATP6AP2A0A1C7CYW4 349 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 TERTO14746 1132 aaKnown RBP20.1■□□□□ 0.81
FXN-202ENST00000396364 EDF1O60869 148 aaKnown RBP20.1■□□□□ 0.81
FXN-202ENST00000396364 PEX11AO75192 247 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 CREG1O75629 220 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 ATP6AP2O75787 350 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 CAPNS1P04632 268 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 ACPPP15309 386 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 TPP2P29144 1249 aaPredicted RBP20.1■□□□□ 0.81
FXN-202ENST00000396364 SNRPNP63162 240 aaKnown RBP20.1■□□□□ 0.81
FXN-202ENST00000396364 ZNF763Q0D2J5 394 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 SSPNQ14714 243 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 HEPACAMQ14CZ8 416 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 NOXRED1Q6NXP6 359 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 RAB43Q86YS6 212 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 ZC3H7AQ8IWR0 971 aaKnown RBP20.1■□□□□ 0.81
FXN-202ENST00000396364 FAM9CQ8IZT9 166 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 FNDC5Q8NAU1 212 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 IP6K3Q96PC2 410 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 SPSB2Q99619 263 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 MAPKAP1Q9BPZ7 522 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 SOX17Q9H6I2 414 aaPredicted RBP20.1■□□□□ 0.81
FXN-202ENST00000396364 C19orf25Q9UFG5 118 aaPredicted RBP20.1■□□□□ 0.81
FXN-202ENST00000396364 MKL2Q9ULH7 1088 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 EIF3LQ9Y262 564 aaKnown RBP20.1■□□□□ 0.81
FXN-202ENST00000396364 MMACHCQ9Y4U1 282 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 USH1CQ9Y6N9 552 aa20.1■□□□□ 0.81
FXN-202ENST00000396364 NUP210LQ5VU65 1888 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 ZNF891A8MT65 544 aaPredicted RBP20.09■□□□□ 0.81
FXN-202ENST00000396364 GBAP04062 536 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 TROVE2P10155 538 aaKnown RBP eCLIP20.09■□□□□ 0.81
FXN-202ENST00000396364 NR2F6P10588 404 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 DDX5P17844 614 aaKnown RBP20.09■□□□□ 0.81
FXN-202ENST00000396364 EMP2P54851 167 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 HSD17B7P56937 341 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 TNFRSF17Q02223 184 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 KLC1Q07866 573 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 MRM1Q6IN84 353 aaKnown RBP20.09■□□□□ 0.81
FXN-202ENST00000396364 QSOX2Q6ZRP7 698 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 ACAD11Q709F0 780 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 VASH2Q86V25 355 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 SPACA3Q8IXA5 215 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 KDF1Q8NAX2 398 aaPredicted RBP20.09■□□□□ 0.81
FXN-202ENST00000396364 OR2T11Q8NH01 316 aa20.09■□□□□ 0.81
FXN-202ENST00000396364 STARD8Q92502 1023 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms