RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 DLX5P56178 289 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 FOLH1Q04609 750 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 PPP1R3AQ16821 1122 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 RNASEH2BQ5TBB1 312 aaKnown RBP19.59■□□□□ 0.73
TRAF4-203ENST00000394925 NDUFAF5Q5TEU4 345 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 FAM45BPQ6NSW5 357 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 GK5Q6ZS86 529 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 KLHDC8AQ8IYD2 350 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 TMEM132CQ8N3T6 1108 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 RASGEF1CQ8N431 466 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 FAM45AQ8TCE6 357 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 MS4A6EQ96DS6 147 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 CERS2Q96G23 380 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 FOXC2Q99958 501 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 MRPS33Q9Y291 106 aaKnown RBP19.59■□□□□ 0.73
TRAF4-203ENST00000394925 L3MBTL1Q9Y468 752 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 FAM215AQ9Y5M1 114 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 CLCA3PQ9Y6N3 262 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 A0A0G2JNJ9 132 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 CDC7O00311 574 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 B3GALT2O43825 422 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 H2AFYO75367 372 aaKnown RBP19.58■□□□□ 0.72
TRAF4-203ENST00000394925 GLSO94925 669 aaPredicted RBP19.58■□□□□ 0.72
TRAF4-203ENST00000394925 IGHG3P01860 377 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 CNR1P21554 472 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 MAGEA5P43359 124 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 ELAVL1Q15717 326 aaKnown RBP19.58■□□□□ 0.72
TRAF4-203ENST00000394925 CYP1B1Q16678 543 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 MSS51Q4VC12 460 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 TEDDM1Q5T9Z0 273 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 RTL6Q6ICC9 239 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 HSDL2Q6YN16 418 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 TRILQ7L0X0 811 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 GALNT7Q86SF2 657 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 TGIF2LYQ8IUE0 185 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 LIX1LQ8IVB5 337 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 ZNF595Q8IYB9 648 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 FAM109AQ8N4B1 249 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 TMEM251Q8N6I4 163 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 CHDHQ8NE62 594 aaPredicted RBP19.58■□□□□ 0.72
TRAF4-203ENST00000394925 MYRIPQ8NFW9 859 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 PDLIM5Q96HC4 596 aaKnown RBP19.58■□□□□ 0.72
TRAF4-203ENST00000394925 EGFL8Q99944 293 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 FAM173AQ9BQD7 235 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 CXXC4Q9H2H0 198 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 Q9UFV3 132 aa19.58■□□□□ 0.72
TRAF4-203ENST00000394925 FAM221AA4D161 298 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 LRIT2A6NDA9 550 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 NPEPPSL1A6NEC2 478 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 CTAG2O75638 210 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 C1GALT1C1LP0DN25 315 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 HOXB4P17483 251 aaPredicted RBP19.57■□□□□ 0.72
TRAF4-203ENST00000394925 HK2P52789 917 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 PLA2G16P53816 162 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 SNTB1Q13884 538 aaKnown RBP19.57■□□□□ 0.72
TRAF4-203ENST00000394925 BBS9Q3SYG4 887 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 TMIGD1Q6UXZ0 262 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 RTL4Q6ZR62 310 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 IGDCC3Q8IVU1 814 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 ZZZ3Q8IYH5 903 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 NINJ1Q92982 152 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 SCYL1Q96KG9 808 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 QRFPRQ96P65 431 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 CSF3RQ99062 836 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 POLDIP3Q9BY77 421 aaKnown RBP19.57■□□□□ 0.72
TRAF4-203ENST00000394925 LIME1Q9H400 295 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 IL1RL2Q9HB29 575 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 ACAD8Q9UKU7 415 aa19.57■□□□□ 0.72
TRAF4-203ENST00000394925 CORO1CQ9ULV4 474 aaPredicted RBP19.57■□□□□ 0.72
TRAF4-203ENST00000394925 HRNRQ86YZ3 2850 aaPredicted RBP19.56■□□□□ 0.72
TRAF4-203ENST00000394925 A0A088AWK7 358 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 A0A1B0GVC2 190 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 ATP6AP2A0A1C7CYW4 349 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 ATP6AP2O75787 350 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 WDR47O94967 919 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 CELA3AP09093 270 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 GNAZP19086 355 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 KLK2P20151 261 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 ZNF10P21506 573 aaPredicted RBP19.56■□□□□ 0.72
TRAF4-203ENST00000394925 ADH7P40394 386 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 GDF5P43026 501 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 PPP2R2AP63151 447 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 SLBPQ14493 270 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRAF4-203ENST00000394925 C18orf21Q32NC0 220 aaPredicted RBP19.56■□□□□ 0.72
TRAF4-203ENST00000394925 ARSKQ6UWY0 536 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 SLCO4C1Q6ZQN7 724 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 FAM47EQ6ZV65 393 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 ZNF321PQ8N8H1 164 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 TTLQ8NG68 377 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 GRK7Q8WTQ7 553 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 DAZLQ92904 295 aaKnown RBP19.56■□□□□ 0.72
TRAF4-203ENST00000394925 NAT9Q9BTE0 207 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 ALOXE3Q9BYJ1 711 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 OR8D2Q9GZM6 311 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 LDAHQ9H6V9 325 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 ALKBH4Q9NXW9 302 aa19.56■□□□□ 0.72
TRAF4-203ENST00000394925 FLNAP21333 2647 aaKnown RBP19.55■□□□□ 0.72
TRAF4-203ENST00000394925 CYR61O00622 381 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 AQP7O14520 342 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 ZNF37AP17032 561 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms