RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CLEC4MQ9H2X3 399 aaPredicted RBP18.09■□□□□ 0.49
HOXC6-202ENST00000394331 LDAHQ9H6V9 325 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 GALNT9Q9HCQ5 603 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 SLC6A13Q9NSD5 602 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 CDH10Q9Y6N8 788 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 NPEPPSL1A6NEC2 478 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 H3BM21 787 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 HMGN1P05114 100 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 RAB3AP20336 220 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 AP1S2P56377 157 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 Q6ZPB1 254 aaPredicted RBP18.08■□□□□ 0.49
HOXC6-202ENST00000394331 PM20D2Q8IYS1 436 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 WBP1Q96G27 269 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 CCM2Q9BSQ5 444 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 ANKRA2Q9H9E1 313 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 MED9Q9NWA0 146 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 MARCH5Q9NX47 278 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 PRELID3BQ9Y3B1 194 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 PCDHB7Q9Y5E2 793 aa18.08■□□□□ 0.49
HOXC6-202ENST00000394331 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.08■□□□□ 0.48
HOXC6-202ENST00000394331 INMT-MINDY4F8WBC2 141 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 DIRAS1O95057 198 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 RHOCP08134 193 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 PTPN6P29350 595 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 CCT3P49368 545 aaKnown RBP18.08■□□□□ 0.48
HOXC6-202ENST00000394331 IL2P60568 153 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 RPS24P62847 133 aaKnown RBP18.08■□□□□ 0.48
HOXC6-202ENST00000394331 ZNF177Q13360 481 aaPredicted RBP18.08■□□□□ 0.48
HOXC6-202ENST00000394331 BTN1A1Q13410 526 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 OR52B6Q8NGF0 335 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 WDR36Q8NI36 951 aaKnown RBP18.08■□□□□ 0.48
HOXC6-202ENST00000394331 HGDQ93099 445 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 HSH2DQ96JZ2 352 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 PPP1R3EQ9H7J1 279 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 TAS2R16Q9NYV7 291 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 NLKQ9UBE8 527 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 EIF2B4Q9UI10 523 aaKnown RBP18.08■□□□□ 0.48
HOXC6-202ENST00000394331 SSR3Q9UNL2 185 aa18.08■□□□□ 0.48
HOXC6-202ENST00000394331 FRMPD3Q5JV73 1810 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 SCAMP3O14828 347 aaKnown RBP18.07■□□□□ 0.48
HOXC6-202ENST00000394331 ANXA8P13928 327 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 CLCN4P51793 760 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 RPL38P63173 70 aaKnown RBP18.07■□□□□ 0.48
HOXC6-202ENST00000394331 HSF2Q03933 536 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 RNLSQ5VYX0 342 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 OVCH2Q7RTZ1 564 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 RAI2Q9Y5P3 530 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 COMMD10Q9Y6G5 202 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 TMEM88BA6NKF7 163 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 RGS14O43566 566 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 PTP4A3O75365 173 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 SLC2A4P14672 509 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 ELNP15502 786 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 MC4RP32245 332 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 KDELR2P33947 212 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 TM4SF4P48230 202 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 SLC11A1P49279 550 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 MAN2A2P49641 1150 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 PPP3R1P63098 170 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 KLHL22Q53GT1 634 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 FBXO48Q5FWF7 155 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 GPSM1Q86YR5 675 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 LRRC17Q8N6Y2 441 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 P2RY13Q9BPV8 354 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 USB1Q9BQ65 265 aaKnown RBP18.07■□□□□ 0.48
HOXC6-202ENST00000394331 CLCA3PQ9Y6N3 262 aa18.07■□□□□ 0.48
HOXC6-202ENST00000394331 PLOD3O60568 738 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 DMC1Q14565 340 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 FLYWCH1Q4VC44 716 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 RTP2Q5QGT7 225 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 DENND1CQ8IV53 801 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 ATP6V1C2Q8NEY4 427 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 KCNJ9Q92806 393 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 C7orf34Q96L11 122 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 TMEM43Q9BTV4 400 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 IMPAD1Q9NX62 359 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 DUSP12Q9UNI6 340 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 HRH3Q9Y5N1 445 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 TRAV19A0A0A6YYK7 116 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 NCF1BA6NI72 391 aaPredicted RBP18.06■□□□□ 0.48
HOXC6-202ENST00000394331 NCF1CA8MVU1 366 aaPredicted RBP18.06■□□□□ 0.48
HOXC6-202ENST00000394331 ANKRD66B4E2M5 251 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 SLC30A4O14863 429 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 HLA-EP13747 358 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 RPL17P18621 184 aaKnown RBP18.06■□□□□ 0.48
HOXC6-202ENST00000394331 IDH2P48735 452 aaKnown RBP18.06■□□□□ 0.48
HOXC6-202ENST00000394331 DOC2BQ14184 412 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 PCBP2Q15366 365 aaKnown RBP eCLIP18.06■□□□□ 0.48
HOXC6-202ENST00000394331 CHST9Q7L1S5 443 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 PIANPQ8IYJ0 282 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 UBE2J2Q8N2K1 259 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 Q8N402 240 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 DCBLD1Q8N8Z6 715 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 CLHC1Q8NHS4 586 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 SMG7Q92540 1137 aaKnown RBP18.06■□□□□ 0.48
HOXC6-202ENST00000394331 UCN3Q969E3 161 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 PELOQ9BRX2 385 aaKnown RBP18.06■□□□□ 0.48
HOXC6-202ENST00000394331 GSX2Q9BZM3 304 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 SLC39A1Q9NY26 324 aa18.06■□□□□ 0.48
HOXC6-202ENST00000394331 FKBPLQ9UIM3 349 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms