RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 FAM47BQ8NA70 645 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 SPC24Q8NBT2 197 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 CSF3RQ99062 836 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 LZTFL1Q9NQ48 299 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 PRTFDC1Q9NRG1 225 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 MYOTQ9UBF9 498 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 KIAA1549Q9HCM3 1950 aa14.25□□□□□ -0.13
CHMP3-202ENST00000393773 WWP2O00308 870 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 AQP7O14520 342 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 ZNF354AO60765 605 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-202ENST00000393773 BANF1O75531 89 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 CELA3AP09093 270 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 ENDOUP21128 410 aaKnown RBP14.24□□□□□ -0.13
CHMP3-202ENST00000393773 HK2P52789 917 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 BTN3A2P78410 334 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 CCZ1BP86790 482 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 CCZ1P86791 482 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-202ENST00000393773 FOXD4Q12950 439 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-202ENST00000393773 RBBP5Q15291 538 aaKnown RBP14.24□□□□□ -0.13
CHMP3-202ENST00000393773 ELAVL1Q15717 326 aaKnown RBP14.24□□□□□ -0.13
CHMP3-202ENST00000393773 CEBPEQ15744 281 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 CYP1B1Q16678 543 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 NDUFAF5Q5TEU4 345 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 ZNF585AQ6P3V2 769 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 CLNKQ7Z7G1 428 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 MYRIPQ8NFW9 859 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 OR10Q1Q8NGQ4 319 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 MS4A6EQ96DS6 147 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 SCYL1Q96KG9 808 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 QRFPRQ96P65 431 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 FAM173AQ9BQD7 235 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 GPATCH1Q9BRR8 931 aaKnown RBP14.24□□□□□ -0.13
CHMP3-202ENST00000393773 NPLQ9BXD5 320 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-202ENST00000393773 TRIM54Q9BYV2 358 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 PLAC1Q9HBJ0 212 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 SLC22A14Q9Y267 594 aa14.24□□□□□ -0.13
CHMP3-202ENST00000393773 FBN3Q75N90 2809 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 ERI3O43414 337 aaKnown RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 NRDCO43847 1150 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 TBX6O95947 436 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 ZNF37AP17032 561 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 STXBP1P61764 594 aaKnown RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 PPP2R2AP63151 447 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 FOXO1Q12778 655 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 SLC13A2Q13183 592 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 HYAL4Q2M3T9 481 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 ZNF750Q32MQ0 723 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 SLC25A35Q3KQZ1 300 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 RNASEH2BQ5TBB1 312 aaKnown RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 CCDC137Q6PK04 289 aaKnown RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 RTL4Q6ZR62 310 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 ZNF662Q6ZS27 426 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 ZNF595Q8IYB9 648 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 RASGEF1CQ8N431 466 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 ZNF321PQ8N8H1 164 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 GOLM1Q8NBJ4 401 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 TRIM58Q8NG06 486 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 SREK1Q8WXA9 508 aaKnown RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 SLCO2A1Q92959 643 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 MAGOHBQ96A72 148 aaKnown RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 CERS2Q96G23 380 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 POLDIP3Q9BY77 421 aaKnown RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 IL1RL2Q9HB29 575 aa14.23□□□□□ -0.13
CHMP3-202ENST00000393773 CORO1CQ9ULV4 474 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-202ENST00000393773 LRIT2A6NDA9 550 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 NPEPPSL1A6NEC2 478 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 CDC7O00311 574 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 CYR61O00622 381 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 SUSD5O60279 629 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 WDR1O75083 606 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 CCL3P10147 92 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 SAT1P21673 171 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 DNASE1L1P49184 302 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 SNTB1Q13884 538 aaKnown RBP14.22□□□□□ -0.13
CHMP3-202ENST00000393773 ADPRMQ3LIE5 342 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 MSS51Q4VC12 460 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 SPANXN3Q5MJ09 141 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 C1orf185Q5T7R7 199 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 FAM45BPQ6NSW5 357 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 ARSKQ6UWY0 536 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 HSDL2Q6YN16 418 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 VN1R5Q7Z5H4 357 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 PPIL6Q8IXY8 311 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 KLHDC8AQ8IYD2 350 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 TMEM132CQ8N3T6 1108 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 GPATCH11Q8N954 259 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 OR14A16Q8NHC5 309 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 FAM45AQ8TCE6 357 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 PTPMT1Q8WUK0 201 aaPredicted RBP14.22□□□□□ -0.13
CHMP3-202ENST00000393773 RMND5BQ96G75 393 aaPredicted RBP14.22□□□□□ -0.13
CHMP3-202ENST00000393773 PDLIM5Q96HC4 596 aaKnown RBP14.22□□□□□ -0.13
CHMP3-202ENST00000393773 FAR2Q96K12 515 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 ALPK1Q96QP1 1244 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 CNPPD1Q9BV87 410 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 CLEC4MQ9H2X3 399 aaPredicted RBP14.22□□□□□ -0.13
CHMP3-202ENST00000393773 GSX1Q9H4S2 264 aaPredicted RBP14.22□□□□□ -0.13
CHMP3-202ENST00000393773 RASSF1Q9NS23 344 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 TUBA8Q9NY65 449 aaPredicted RBP14.22□□□□□ -0.13
CHMP3-202ENST00000393773 SPRR3Q9UBC9 169 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 MRPS33Q9Y291 106 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms