RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 GSTT2P0CG29 244 aa18■□□□□ 0.47
CBX1-202ENST00000393408 GSTT2BP0CG30 244 aa18■□□□□ 0.47
CBX1-202ENST00000393408 LAG3P18627 525 aa18■□□□□ 0.47
CBX1-202ENST00000393408 MAGP20916 626 aa18■□□□□ 0.47
CBX1-202ENST00000393408 CNR2P34972 360 aa18■□□□□ 0.47
CBX1-202ENST00000393408 SOAT1P35610 550 aa18■□□□□ 0.47
CBX1-202ENST00000393408 STARD3Q14849 445 aa18■□□□□ 0.47
CBX1-202ENST00000393408 MED22Q15528 200 aa18■□□□□ 0.47
CBX1-202ENST00000393408 PLAG1Q6DJT9 500 aa18■□□□□ 0.47
CBX1-202ENST00000393408 FRMPD2BQ6IN97 320 aa18■□□□□ 0.47
CBX1-202ENST00000393408 PTCHD4Q6ZW05 846 aa18■□□□□ 0.47
CBX1-202ENST00000393408 SORCS1Q8WY21 1168 aa18■□□□□ 0.47
CBX1-202ENST00000393408 NMNAT1Q9HAN9 279 aaPredicted RBP18■□□□□ 0.47
CBX1-202ENST00000393408 CLN6Q9NWW5 311 aa18■□□□□ 0.47
CBX1-202ENST00000393408 RHCGQ9UBD6 479 aa18■□□□□ 0.47
CBX1-202ENST00000393408 MKLN1Q9UL63 735 aa18■□□□□ 0.47
CBX1-202ENST00000393408 SNX4O95219 450 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 KLK1P06870 262 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 TYRP14679 529 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 XPAP23025 273 aaPredicted RBP17.99■□□□□ 0.47
CBX1-202ENST00000393408 CA8P35219 290 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 SOX6P35712 828 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 CCR2P41597 374 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 PIK3CBP42338 1070 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 SLC15A1P46059 708 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 MEF2AQ02078 507 aaPredicted RBP17.99■□□□□ 0.47
CBX1-202ENST00000393408 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.99■□□□□ 0.47
CBX1-202ENST00000393408 CCDC190Q86UF4 302 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 SLC44A2Q8IWA5 706 aaPredicted RBP17.99■□□□□ 0.47
CBX1-202ENST00000393408 CYB5D2Q8WUJ1 264 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 IRF7Q92985 503 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 MRGPRX3Q96LB0 322 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 TAPBPLQ9BX59 468 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 MTG2Q9H4K7 406 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 KCND3Q9UK17 655 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 POU2F3Q9UKI9 436 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 OGDHLQ9ULD0 1010 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 CFL2Q9Y281 166 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 KIF26AQ9ULI4 1882 aaPredicted RBP17.99■□□□□ 0.47
CBX1-202ENST00000393408 CCRL2O00421 344 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 ARHGAP33O14559 1287 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 IFNW1P05000 195 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 MMP12P39900 470 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 SSX1Q16384 188 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 LRIT3Q3SXY7 679 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 POM121L1PQ3SYA9 428 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 TIMM50Q3ZCQ8 353 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 HIST2H2AA3Q6FI13 130 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 UNC5DQ6UXZ4 953 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 LIPIQ6XZB0 460 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 GDPD3Q7L5L3 318 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 LRRC56Q8IYG6 542 aaPredicted RBP17.99■□□□□ 0.47
CBX1-202ENST00000393408 VWCEQ96DN2 955 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 DSPPQ9NZW4 1301 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 CCDC88CQ9P219 2028 aa17.99■□□□□ 0.47
CBX1-202ENST00000393408 PNMA8CA0A1B0GUJ8 204 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 KMOO15229 486 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 C8AP07357 584 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 IL3P08700 152 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 ELFN1P0C7U0 828 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 PIPP12273 146 aaPredicted RBP17.98■□□□□ 0.47
CBX1-202ENST00000393408 DSTNP60981 165 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 PUM1Q14671 1186 aaKnown RBP eCLIP17.98■□□□□ 0.47
CBX1-202ENST00000393408 DUSP7Q16829 419 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 ZNF805Q5CZA5 627 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 CNKSR3Q6P9H4 555 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 NXPE4Q6UWF7 544 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 SLC30A8Q8IWU4 369 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 MMP21Q8N119 569 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 SLAIN1Q8ND83 568 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 WDR36Q8NI36 951 aaKnown RBP17.98■□□□□ 0.47
CBX1-202ENST00000393408 APOBEC4Q8WW27 367 aaKnown RBP17.98■□□□□ 0.47
CBX1-202ENST00000393408 SLC5A11Q8WWX8 675 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 HHIPL1Q96JK4 782 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 IL36AQ9UHA7 158 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 KIAA1549LQ6ZVL6 1849 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 FAM227AF5H4B4 570 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 FFAR1O14842 300 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 TAP2Q03519 686 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 FOXD4Q12950 439 aaPredicted RBP17.98■□□□□ 0.47
CBX1-202ENST00000393408 KRR1Q13601 381 aaKnown RBP17.98■□□□□ 0.47
CBX1-202ENST00000393408 SPANXN2Q5MJ10 180 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 CCBE1Q6UXH8 406 aaPredicted RBP17.98■□□□□ 0.47
CBX1-202ENST00000393408 CFAP206Q8IYR0 622 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 FAM46DQ8NEK8 389 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 OR9A1PQ8NGU1 263 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 CHAC2Q8WUX2 184 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 SDHCQ99643 169 aaPredicted RBP17.98■□□□□ 0.47
CBX1-202ENST00000393408 CTRCQ99895 268 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 SLC6A16Q9GZN6 736 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 EPHX3Q9H6B9 360 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 SLC25A19Q9HC21 320 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 ASAH2Q9NR71 780 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 TAAR2Q9P1P5 351 aa17.98■□□□□ 0.47
CBX1-202ENST00000393408 GPX5O75715 221 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 EIF2S1P05198 315 aaKnown RBP17.97■□□□□ 0.47
CBX1-202ENST00000393408 UQCRC2P22695 453 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 ATN1P54259 1190 aaPredicted RBP17.97■□□□□ 0.47
CBX1-202ENST00000393408 LIM2P55344 173 aa17.97■□□□□ 0.47
CBX1-202ENST00000393408 TP53BP2Q13625 1128 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms