RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 SYNDIG1LA6NDD5 238 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 A8MT66 165 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 A8MUI8 341 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 FOXE1O00358 373 aaPredicted RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 SHBGP04278 402 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 GSTA1P08263 222 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 RPS17P08708 135 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 PYGBP11216 843 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 TAC1P20366 129 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 SSR2P43308 183 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 TSFMP43897 325 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 SLC26A5P58743 744 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ARG2P78540 354 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 TRAF3Q13114 568 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ZNF169Q14929 603 aaPredicted RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 RASA2Q15283 850 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ZRSR2Q15696 482 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 PRR30Q53SZ7 412 aaPredicted RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 C10orf62Q5T681 223 aaPredicted RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 B3GNTL1Q67FW5 361 aaPredicted RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 OR4C11Q6IEV9 310 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ZNF793Q6ZN11 406 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 TDRPQ86YL5 185 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 GALNT11Q8NCW6 608 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 OR52B6Q8NGF0 335 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 SNRNP40Q96DI7 357 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 CNDP1Q96KN2 507 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ZNF354BQ96LW1 612 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 NSUN5Q96P11 429 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 KCNK13Q9HB14 408 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ZBTB26Q9HCK0 441 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 STMN3Q9NZ72 180 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 TBK1Q9UHD2 729 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 DCDC2Q9UHG0 476 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 PPT2Q9UMR5 302 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 SPTBN1Q01082 2364 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 BLACEA4D250 179 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 SAGE2PA6NJ88 616 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 GOLGA8RI6L899 631 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 SAP18O00422 153 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 RTCAO00442 366 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 CTNSO60931 367 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 VPS4BO75351 444 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 SH3BGRLO75368 114 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 WDPCPO95876 746 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 OTCP00480 354 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ARL1P40616 181 aaPredicted RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 TNFSF10P50591 281 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 RAP1GDS1P52306 607 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 HNRNPFP52597 415 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 TAS2R50P59544 299 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 RPS13P62277 151 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 HERVK_113P63132 956 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ZNF33BQ06732 778 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 SLC13A2Q13183 592 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 CUL3Q13618 768 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 TERF2Q15554 542 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 GGTA1PQ4G0N0 100 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ACER2Q5QJU3 275 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 RNF175Q8N4F7 328 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 CISD2Q8N5K1 135 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 SLC5A8Q8N695 610 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 FAM47BQ8NA70 645 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 TMEM52Q8NDY8 209 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 CATSPER1Q8NEC5 780 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 WDR20Q8TBZ3 569 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ELP5Q8TE02 316 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ZNF483Q8TF39 744 aaPredicted RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 MAGEB10Q96LZ2 347 aaPredicted RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 CDK15Q96Q40 435 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 CSF3RQ99062 836 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 BARD1Q99728 777 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 MAPKAP1Q9BPZ7 522 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 ERVK-6Q9BXR3 956 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 SEMA4BQ9NPR2 832 aaPredicted RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 PLA2G3Q9NZ20 509 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 VPS4AQ9UN37 437 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 CLDN16Q9Y5I7 305 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 COPG1Q9Y678 874 aaKnown RBP11.09□□□□□ -0.63
RFC4-202ENST00000392481 SPACA6W5XKT8 324 aa11.09□□□□□ -0.63
RFC4-202ENST00000392481 TRAV17A0A0B4J275 112 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 TGFBR3LH3BV60 316 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 PLPP1O14494 284 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 DLX3O60479 287 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 CDH16O75309 829 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 SLU7O95391 586 aaKnown RBP11.08□□□□□ -0.64
RFC4-202ENST00000392481 ATP5F1P24539 256 aaPredicted RBP11.08□□□□□ -0.64
RFC4-202ENST00000392481 HSD17B3P37058 310 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 SLCO1A2P46721 670 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 NEK2P51955 445 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 VSNL1P62760 191 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 FRG2Q64ET8 278 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 SH2D5Q6ZV89 423 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 MILR1Q7Z6M3 343 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 LGI4Q8N135 537 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 ZCCHC7Q8N3Z6 543 aaKnown RBP11.08□□□□□ -0.64
RFC4-202ENST00000392481 NFAM1Q8NET5 270 aaPredicted RBP11.08□□□□□ -0.64
RFC4-202ENST00000392481 MYRIPQ8NFW9 859 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 C19orf60Q96EN9 201 aa11.08□□□□□ -0.64
RFC4-202ENST00000392481 FRG2BQ96QU4 278 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms