RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 RUNX2Q13950 521 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ABRAXAS2Q15018 415 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 CHI3L2Q15782 390 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 SYT16Q17RD7 645 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 COL28A1Q2UY09 1125 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 SPIN4Q56A73 249 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ATG16L1Q676U5 607 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ADNP2Q6IQ32 1131 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 TMEM205Q6UW68 189 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 QSOX2Q6ZRP7 698 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 NUDT13Q86X67 352 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 APLFQ8IW19 511 aaPredicted RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ZC3H7AQ8IWR0 971 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ZNF595Q8IYB9 648 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 CA13Q8N1Q1 262 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 METTL4Q8N3J2 472 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 DTWD1Q8N5C7 304 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ARFGAP2Q8N6H7 521 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ANKRD42Q8N9B4 389 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 FAM76AQ8TAV0 307 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 CHTF18Q8WVB6 975 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 APOBEC4Q8WW27 367 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 WBP1Q96G27 269 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 PEX11GQ96HA9 241 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 PAIP2Q9BPZ3 127 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ILKAPQ9H0C8 392 aaPredicted RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 SOX17Q9H6I2 414 aaPredicted RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 PRDM9Q9NQV7 894 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ACSS2Q9NR19 701 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 FARSBQ9NSD9 589 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 LYARQ9NX58 379 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 SIRT5Q9NXA8 310 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 KCMF1Q9P0J7 381 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 HCN3Q9P1Z3 774 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 C19orf25Q9UFG5 118 aaPredicted RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 PHF11Q9UIL8 331 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 MKL2Q9ULH7 1088 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 SLC12A4Q9UP95 1085 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 WBP11Q9Y2W2 641 aaKnown RBP6.38□□□□□ -1.39
UBBP1-201ENST00000392399 TRAF6Q9Y4K3 522 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 MMACHCQ9Y4U1 282 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 TIMM22Q9Y584 194 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 FER1L5A0AVI2 2057 aa6.38□□□□□ -1.39
UBBP1-201ENST00000392399 ATMQ13315 3056 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 LOC102723996A0A087X1L8 192 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 A0A0G2JN53 185 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 ARHGAP10A1A4S6 786 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 WDR91A4D1P6 747 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 ZNF860A6NHJ4 632 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 C4orf51C9J302 202 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 SAP18O00422 153 aaKnown RBP6.37□□□□□ -1.39
UBBP1-201ENST00000392399 CYR61O00622 381 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 KLF11O14901 512 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 RGS14O43566 566 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 CTNSO60931 367 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 ALOX12BO75342 701 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 ETHE1O95571 254 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 HSPA4LO95757 839 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 B3GALT4O96024 378 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 CHRNGP07510 517 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 FURINP09958 794 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 FAM58BPP0C7Q3 252 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 C8orf89P0DMQ9 161 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 PRKAR1AP10644 381 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 SFTPCP11686 197 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 PRPH2P23942 346 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 CERS1P27544 350 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 PPP2R1BP30154 601 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 OTX2P32243 289 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 BSGP35613 385 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 BUD31P41223 144 aaPredicted RBP6.37□□□□□ -1.39
UBBP1-201ENST00000392399 CCR10P46092 362 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 GSTM5P46439 218 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 SLC1A6P48664 564 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 FOXA1P55317 472 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 SOX8P57073 446 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 WDR4P57081 412 aaKnown RBP6.37□□□□□ -1.39
UBBP1-201ENST00000392399 ABCE1P61221 599 aaKnown RBP6.37□□□□□ -1.39
UBBP1-201ENST00000392399 AP2B1P63010 937 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 PPP2R2AP63151 447 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 TBL3Q12788 808 aaKnown RBP6.37□□□□□ -1.39
UBBP1-201ENST00000392399 STX3Q13277 289 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 IL10RAQ13651 578 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 NSDHLQ15738 373 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 IMPG1Q17R60 797 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 UGT3A2Q3SY77 523 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 MINDY4Q4G0A6 757 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 TTMPQ5BVD1 217 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 SGO1Q5FBB7 561 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 KANK2Q63ZY3 851 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 MRM1Q6IN84 353 aaKnown RBP6.37□□□□□ -1.39
UBBP1-201ENST00000392399 GALNT18Q6P9A2 607 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 BORAQ6PGQ7 559 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 C19orf48Q6RUI8 117 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 CYP20A1Q6UW02 462 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 ZNF793Q6ZN11 406 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 ZCCHC23Q6ZST2 131 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 GPR180Q86V85 440 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 PRSS58Q8IYP2 241 aa6.37□□□□□ -1.39
UBBP1-201ENST00000392399 RNF175Q8N4F7 328 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms