RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
ERCC2-201ENST00000391941 PCGF2P35227 344 aa17.22■□□□□ 0.35
ERCC2-201ENST00000391941 PXNP49023 591 aaPredicted RBP17.22■□□□□ 0.35
ERCC2-201ENST00000391941 ZNF157P51786 506 aaPredicted RBP17.22■□□□□ 0.35
ERCC2-201ENST00000391941 HNRNPA0Q13151 305 aaKnown RBP17.22■□□□□ 0.35
ERCC2-201ENST00000391941 KRR1Q13601 381 aaKnown RBP17.22■□□□□ 0.35
ERCC2-201ENST00000391941 VEPH1Q14D04 833 aa17.22■□□□□ 0.35
ERCC2-201ENST00000391941 CDK10Q15131 360 aa17.22■□□□□ 0.35
ERCC2-201ENST00000391941 CDKL4Q5MAI5 379 aa17.22■□□□□ 0.35
ERCC2-201ENST00000391941 PLAG1Q6DJT9 500 aa17.22■□□□□ 0.35
ERCC2-201ENST00000391941 OR7G3Q8NG95 312 aa17.22■□□□□ 0.35
ERCC2-201ENST00000391941 CASD1Q96PB1 797 aa17.22■□□□□ 0.35
ERCC2-201ENST00000391941 OR2B2Q9GZK3 357 aa17.22■□□□□ 0.35
ERCC2-201ENST00000391941 PCM1Q15154 2024 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 MEN1O00255 615 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 PRMT3O60678 531 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 MYCP01106 439 aaPredicted RBP17.21■□□□□ 0.35
ERCC2-201ENST00000391941 OR56A5P0C7T3 313 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 TNNI3P19429 210 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 GPLD1P80108 840 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 PUM1Q14671 1186 aaKnown RBP eCLIP17.21■□□□□ 0.35
ERCC2-201ENST00000391941 FAM209AQ5JX71 171 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 CST9Q5W186 159 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 Q6ZVL8 140 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 TCEANCQ8N8B7 351 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 DENND6BQ8NEG7 585 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 SLC6A18Q96N87 628 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 TRPV5Q9NQA5 729 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 CCDC177Q9NQR7 707 aaPredicted RBP17.21■□□□□ 0.35
ERCC2-201ENST00000391941 B4GALT6Q9UBX8 382 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 RUVBL1Q9Y265 456 aaKnown RBP17.21■□□□□ 0.35
ERCC2-201ENST00000391941 KLK4Q9Y5K2 254 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 AGAP14A8MT82 685 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 ERVH48-1M5A8F1 160 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 AKR7A2O43488 359 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 C8GP07360 202 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 ETV6P41212 452 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 HNMTP50135 292 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 CTSCP53634 463 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 OLR1P78380 273 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 PRKCZQ05513 592 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 FLYWCH1Q4VC44 716 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 OR2G6Q5TZ20 316 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 AGTRAPQ6RW13 159 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 TM9SF2Q99805 663 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 POLR2J2Q9GZM3 115 aaKnown RBP17.21■□□□□ 0.35
ERCC2-201ENST00000391941 CLCA3PQ9Y6N3 262 aa17.21■□□□□ 0.35
ERCC2-201ENST00000391941 SZT2Q5T011 3432 aa17.21■□□□□ 0.34
ERCC2-201ENST00000391941 ANXA8P13928 327 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 CDC42P60953 191 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 CDK6Q00534 326 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 HYAL2Q12891 473 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 FRMPD2BQ6IN97 320 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 ZNF783Q6ZMS7 281 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 TMEM150AQ86TG1 271 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 CMTM8Q8IZV2 173 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 VN1R3Q9BXE9 311 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 SPATA6Q9NWH7 488 aaPredicted RBP17.2■□□□□ 0.34
ERCC2-201ENST00000391941 SEPT4O43236 478 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 TSPAN6O43657 245 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 TNFRSF21O75509 655 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 NCR1O76036 304 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 ATP1B2P14415 290 aaPredicted RBP17.2■□□□□ 0.34
ERCC2-201ENST00000391941 CD79BP40259 229 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 ETV3P41162 512 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 CRYBB2P43320 205 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 GCNT6Q5T4J0 391 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 TTC23LQ6PF05 361 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 B3GLCTQ6Y288 498 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 DEF8Q6ZN54 512 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 ZNF367Q7RTV3 350 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 ZNF366Q8N895 744 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 DCAF4L2Q8NA75 395 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 PIK3R3Q92569 461 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 ACAT2Q9BWD1 397 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 PCDHB7Q9Y5E2 793 aa17.2■□□□□ 0.34
ERCC2-201ENST00000391941 DOCK6Q96HP0 2047 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 A0A1W2PQL4 384 aaPredicted RBP17.19■□□□□ 0.34
ERCC2-201ENST00000391941 GLTPD2A6NH11 291 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 RTCAO00442 366 aaKnown RBP17.19■□□□□ 0.34
ERCC2-201ENST00000391941 CYP2A7P20853 494 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 HNF4AP41235 474 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 CRISP1P54107 249 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 TAS2R50P59544 299 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 EIF4HQ15056 248 aaKnown RBP17.19■□□□□ 0.34
ERCC2-201ENST00000391941 SLX4IPQ5VYV7 408 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 KIAA1841Q6NSI8 718 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 ERAP2Q6P179 960 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 DPY19L3Q6ZPD9 716 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 Q6ZVU0 165 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 SZRD1Q7Z422 152 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 CRELD1Q96HD1 420 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 GFM1Q96RP9 751 aaKnown RBP17.19■□□□□ 0.34
ERCC2-201ENST00000391941 PRR14Q9BWN1 585 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 TAPBPLQ9BX59 468 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 SRRQ9GZT4 340 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 MIXL1Q9H2W2 232 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 ZNF334Q9HCZ1 680 aaPredicted RBP17.19■□□□□ 0.34
ERCC2-201ENST00000391941 DYRK4Q9NR20 520 aa17.19■□□□□ 0.34
ERCC2-201ENST00000391941 FTSJ1Q9UET6 329 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms