RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RSPH14Q9UHP6 348 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 FBXO7Q9Y3I1 522 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 BCLAF3A2AJT9 711 aaKnown RBP2.29□□□□□ -2.04
TRAV40-201ENST00000390467 ZSCAN5CA6NGD5 496 aaPredicted RBP2.29□□□□□ -2.04
TRAV40-201ENST00000390467 A8MXE2 369 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 FAM86B1E9PN63 330 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 E2F3O00716 465 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 TBX10O75333 385 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 FAM86B2P0C5J1 330 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 PSMA3P25788 255 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 CRKLP46109 303 aaKnown RBP2.29□□□□□ -2.04
TRAV40-201ENST00000390467 SLC1A6P48664 564 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 RPL34P49207 117 aaKnown RBP2.29□□□□□ -2.04
TRAV40-201ENST00000390467 PTENP60484 403 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 FASTKQ14296 549 aaKnown RBP2.29□□□□□ -2.04
TRAV40-201ENST00000390467 C17orf58Q2M2W7 97 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 RFTN2Q52LD8 501 aaPredicted RBP2.29□□□□□ -2.04
TRAV40-201ENST00000390467 C6orf136Q5SQH8 315 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 KHDRBS2Q5VWX1 349 aaKnown RBP2.29□□□□□ -2.04
TRAV40-201ENST00000390467 TMED8Q6PL24 325 aaPredicted RBP2.29□□□□□ -2.04
TRAV40-201ENST00000390467 CCAR2Q8N163 923 aaKnown RBP2.29□□□□□ -2.04
TRAV40-201ENST00000390467 OCC1Q8TAD7 63 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 SAP25Q8TEE9 199 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 HEXDCQ8WVB3 486 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 ST6GALNAC6Q969X2 333 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 SLC35C1Q96A29 364 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 TSSK2Q96PF2 358 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 SP140LQ9H930 580 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 LMAN1LQ9HAT1 526 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 NMUR1Q9HB89 426 aa2.29□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF487B1APH4 448 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 E7ENQ6 273 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 P4HA2O15460 535 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 P2RX6O15547 441 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 LRRTM2O43300 516 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 ACSL4O60488 711 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 RHBDL1O75783 438 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 FGF19O95750 216 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 MOCS2O96007 188 aaPredicted RBP2.28□□□□□ -2.04
TRAV40-201ENST00000390467 DNTTP04053 509 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 ANKRD34CP0C6C1 535 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 SLC1A3P43003 542 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 OR3A1P47881 315 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 TTC31Q49AM3 519 aaPredicted RBP2.28□□□□□ -2.04
TRAV40-201ENST00000390467 PLPP4Q5VZY2 271 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 TXNRD3NBQ6F5E7 133 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF600Q6ZNG1 722 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 TMEM182Q6ZP80 229 aaPredicted RBP2.28□□□□□ -2.04
TRAV40-201ENST00000390467 DNAJB7Q7Z6W7 309 aaPredicted RBP2.28□□□□□ -2.04
TRAV40-201ENST00000390467 TBC1D10CQ8IV04 446 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 CCDC71Q8IV32 467 aaPredicted RBP2.28□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF781Q8N8C0 355 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 PCNPQ8WW12 178 aaKnown RBP2.28□□□□□ -2.04
TRAV40-201ENST00000390467 VPS33AQ96AX1 596 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 BPIFA2Q96DR5 249 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF285Q96NJ3 590 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 ANKRD27Q96NW4 1050 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 ZBP1Q9H171 429 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF275Q9NSD4 429 aaPredicted RBP2.28□□□□□ -2.04
TRAV40-201ENST00000390467 ANKEF1Q9NU02 776 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 CHCHD3Q9NX63 227 aaKnown RBP2.28□□□□□ -2.04
TRAV40-201ENST00000390467 SNX7Q9UNH6 387 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 PCDHGA1Q9Y5H4 931 aa2.28□□□□□ -2.04
TRAV40-201ENST00000390467 PGLSO95336 258 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 OR9G9P0C7N8 305 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 HMGCS2P54868 508 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 RPP38P78345 283 aaKnown RBP2.27□□□□□ -2.05
TRAV40-201ENST00000390467 CALD1Q05682 793 aaKnown RBP2.27□□□□□ -2.05
TRAV40-201ENST00000390467 GPR50Q13585 617 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 CRMP1Q14194 572 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 RASA2Q15283 850 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 REP15Q6BDI9 236 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 RPUSD3Q6P087 351 aaKnown RBP2.27□□□□□ -2.05
TRAV40-201ENST00000390467 C16orf54Q6UWD8 224 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 C11orf57Q6ZUT1 292 aaPredicted RBP2.27□□□□□ -2.05
TRAV40-201ENST00000390467 PRR22Q8IZ63 422 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 ZNF491Q8N8L2 437 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 OR13C5Q8NGS8 318 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 GPR148Q8TDV2 347 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 FER1L6-AS2Q96M78 137 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 TXLNGYQ9BZA5 131 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 NACAP1Q9BZK3 213 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 SH3GLB2Q9NR46 395 aa2.27□□□□□ -2.05
TRAV40-201ENST00000390467 HBS1LQ9Y450 684 aaKnown RBP2.27□□□□□ -2.05
TRAV40-201ENST00000390467 OR5H15A6NDH6 313 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 ELK1P19419 428 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 HMGCLP35914 325 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 RAD52P43351 418 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 TNFRSF4P43489 277 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 MEOX2P50222 304 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 ARMCX4Q5H9R4 360 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 CREBRFQ8IUR6 639 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 CARNMT1Q8N4J0 409 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 ZNF525Q8N782 197 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 IQUBQ8NA54 791 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 SMYD1Q8NB12 490 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 NTNG2Q96CW9 530 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 SIGLEC12Q96PQ1 595 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 PRMT1Q99873 361 aaKnown RBP2.26□□□□□ -2.05
TRAV40-201ENST00000390467 MTIF3Q9H2K0 278 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms