RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SLC44A2Q8IWA5 706 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CLECL1Q8IZS7 167 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 RBFAQ8N0V3 343 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 EFHBQ8N7U6 833 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 L3MBTL4Q8NA19 623 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ATG16L2Q8NAA4 619 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PLA2G15Q8NCC3 412 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 KLHDC9Q8NEP7 349 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ATP6V1C2Q8NEY4 427 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 LPCAT1Q8NF37 534 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PROKR2Q8NFJ6 384 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 TET1Q8NFU7 2136 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 OR4K2Q8NGD2 314 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 OR8J2Q8NGG1 315 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 LILRB1Q8NHL6 650 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 GOT1L1Q8NHS2 421 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 WDR36Q8NI36 951 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SCAMP5Q8TAC9 235 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 WDR48Q8TAF3 677 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 TMEM163Q8TC26 289 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 HAVCR2Q8TDQ0 301 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SMG7Q92540 1137 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 FBXW5Q969U6 566 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PMEPA1Q969W9 287 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 EID2BQ96D98 161 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CMTM7Q96FZ5 175 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 APIPQ96GX9 242 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CCDC120Q96HB5 630 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 LCORQ96JN0 433 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SPATA17Q96L03 361 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 C8orf48Q96LL4 319 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MAGEB10Q96LZ2 347 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 HYLS1Q96M11 299 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZFP42Q96MM3 310 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 RPRD1AQ96P16 312 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PSKH2Q96QS6 385 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZIC5Q96T25 663 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZBTB18Q99592 522 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 COQ7Q99807 217 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ATF6BQ99941 703 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MAPKAP1Q9BPZ7 522 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PAAF1Q9BRP4 392 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 TSEN34Q9BSV6 310 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MED10Q9BTT4 135 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 C2orf49Q9BVC5 232 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SHARPINQ9H0F6 387 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SIK2Q9H0K1 926 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PIGUQ9H490 435 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 IPPKQ9H8X2 491 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 RDH14Q9HBH5 336 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SARS2Q9NP81 518 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SNTG1Q9NSN8 517 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MRPS18AQ9NVS2 196 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 FAM120CQ9NX05 1096 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZSCAN32Q9NX65 697 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MS4A12Q9NXJ0 267 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PIM2Q9P1W9 311 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 RBPJLQ9UBG7 517 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 STOML2Q9UJZ1 356 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ING1Q9UK53 422 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 FBXO9Q9UK97 447 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ACAD8Q9UKU7 415 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 VPS4AQ9UN37 437 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 FNDC3AQ9Y2H6 1198 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 HSPB11Q9Y547 144 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 IPPQ9Y573 584 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SNX8Q9Y5X2 465 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CSADQ9Y600 493 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ACTL7AQ9Y615 435 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 FKBP7Q9Y680 259 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 COMMD10Q9Y6G5 202 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 KCNE2Q9Y6J6 123 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PRSS21Q9Y6M0 314 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SCN2AQ99250 2005 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 NOTCH4Q99466 2003 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PDE4DIPQ5VU43 2346 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 A0A0G2JK05 382 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 PRAMEF33A0A0G2JMD5 474 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 LOC102723532A0A0G2JNH3 316 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 A0A0U1RQF3 1178 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 SMIM35A0A1B0GVV1 85 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TRDV1A0A1B0GX56 115 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 A0A1W2PQH9 124 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 A0A1W2PQL4 384 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 SLC22A23A1A5C7 686 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 OR6C65A6NJZ3 312 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 AGAP14A8MT82 685 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 IQCF5A8MTL0 148 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 H3BUI4 141 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 I3L521 148 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 LINC01387J3KSC0 135 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 J3KTA2 159 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 M0QZQ0 153 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TNFRSF11BO00300 401 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 RFXANKO14593 260 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 DVL2O14641 736 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 SCAMP2O15127 329 aaKnown RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ADAMDEC1O15204 470 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms