RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ATP6V1C2Q8NEY4 427 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 CCDC115Q96NT0 180 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 DPCDQ9BVM2 203 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 IL26Q9NPH9 171 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 B4GALT6Q9UBX8 382 aa12.62□□□□□ -0.39
TRAPPC9-201ENST00000389328 MANSC4A6NHS7 340 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 METTL15A6NJ78 407 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 CD8B2A6NJW9 211 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 ANKRD28O15084 1053 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 EEF1E1O43324 174 aaKnown RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 MRPS14O60783 128 aaKnown RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 CD8BP10966 210 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 PNLIPRP1P54315 467 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 RAB8AP61006 207 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 GPR17Q13304 367 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 GRB14Q14449 540 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 SERPINA11Q86U17 422 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZNF366Q8N895 744 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZNF300Q96RE9 604 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 CTRCQ99895 268 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 IKZF5Q9H5V7 419 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 NMNAT1Q9HAN9 279 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 COMMD9Q9P000 198 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 PPIEQ9UNP9 301 aaKnown RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 C2orf92A0A1B0GVN3 265 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 ABHD14A-ACY1A0A1B0GW23 586 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 PI15O43692 258 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 ALPPL2P10696 532 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 TIA1P31483 386 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 NCBP2P52298 156 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 PPP3R1P63098 170 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 SELENBP1Q13228 472 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 WDR45BQ5MNZ6 344 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 HSDL2Q6YN16 418 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 YAF2Q8IY57 180 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 DNAJC22Q8N4W6 341 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLA2Q9H6Q3 261 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 NTN4Q9HB63 628 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 P2RX2Q9UBL9 471 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 GPR52Q9Y2T5 361 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 N6AMT1Q9Y5N5 214 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 CFAP20Q9Y6A4 193 aaKnown RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 URB1O60287 2271 aaKnown RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 HMX3A6NHT5 357 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 ENTPD6O75354 484 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 GJA1P17302 382 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 OMPP47874 163 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC35F1Q5T1Q4 408 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 LIN54Q6MZP7 749 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 ENTHD1Q8IYW4 607 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 CMTM8Q8IZV2 173 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 CHCHD4Q8N4Q1 142 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 CXorf40AQ8TE69 158 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR5M11Q96RB7 305 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 IFT27Q9BW83 186 aa12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 GPN1Q9HCN4 374 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 AKAP7Q9P0M2 348 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-201ENST00000389328 NHSQ6T4R5 1651 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 IQCMA0A1B0GVH7 501 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 FAM25EA8MYX2 175 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 RHCEP18577 417 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 EIF4HQ15056 248 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 PYCR3Q53H96 274 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZNF311Q5JNZ3 666 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 LIPJQ5W064 366 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 CBLL1Q75N03 491 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 DNAJB7Q7Z6W7 309 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 TMEM179BQ7Z7N9 219 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR51G2Q8NGK0 314 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 HUS1BQ8NHY5 278 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 TTTY10Q9BZA0 68 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 GPR62Q9BZJ7 368 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 KLHL31Q9H511 634 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 AKIP1Q9NQ31 210 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 ASAH2Q9NR71 780 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 SCAMP2O15127 329 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 B3GALT4O96024 378 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 FCER2P06734 321 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 SRPRAP08240 638 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 NUP62P37198 522 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 FGFBP1Q14512 234 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 XKR7Q5GH72 579 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 XAF1Q6GPH4 301 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 XKRXQ6PP77 449 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC46A3Q7Z3Q1 461 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 LAX1Q8IWV1 398 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 DYNC2LI1Q8TCX1 351 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 KCNN1Q92952 543 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 C12orf66Q96MD2 445 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZNF558Q96NG5 402 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 CSF3RQ99062 836 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 GAL3ST1Q99999 423 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 BRD7Q9NPI1 651 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 PRSS21Q9Y6M0 314 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 GLOD5A6NK44 160 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 TMEM88BA6NKF7 163 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 RIIAD1A6NNX1 92 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 WASH4PA8MWX3 477 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms