RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CEACAM8P31997 349 aaPredicted RBP16■□□□□ 0.15
HMGN1-203ENST00000380748 RPL22P35268 128 aaKnown RBP16■□□□□ 0.15
HMGN1-203ENST00000380748 PIGAP37287 484 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 SCTRP47872 440 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 ZNF136P52737 540 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 SNX1Q13596 522 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 CATSPEREQ5SY80 951 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 ZNF470Q6ECI4 717 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 KIAA0930Q6ICG6 404 aaPredicted RBP16■□□□□ 0.15
HMGN1-203ENST00000380748 NEPROQ6NW34 567 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 STRA8Q7Z7C7 330 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 KIF18BQ86Y91 864 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 FBXW8Q8N3Y1 598 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 UBL4BQ8N7F7 174 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 CCDC89Q8N998 374 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 TC2NQ8N9U0 490 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 GOLM1Q8NBJ4 401 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 TMEM52Q8NDY8 209 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 PYCR2Q96C36 320 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 CALR3Q96L12 384 aaKnown RBP16■□□□□ 0.15
HMGN1-203ENST00000380748 FBXO6Q9NRD1 293 aaPredicted RBP16■□□□□ 0.15
HMGN1-203ENST00000380748 ZFP69BQ9UJL9 534 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 AMFRQ9UKV5 643 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 SOX13Q9UN79 622 aa16■□□□□ 0.15
HMGN1-203ENST00000380748 TRIM64A6NGJ6 449 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 TRIM64BA6NI03 449 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 P04436 131 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 RFPL3SP0C7P2 107 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 SMIM10L1P0DMW3 83 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 CCND1P24385 295 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 HNRNPFP52597 415 aaKnown RBP15.99■□□□□ 0.15
HMGN1-203ENST00000380748 ACSF3Q4G176 576 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-203ENST00000380748 HSDL2Q6YN16 418 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 PEX26Q7Z412 305 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 MAATS1Q7Z4T9 603 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 DENND6AQ8IWF6 608 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 CCDC170Q8IYT3 715 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 C1orf54Q8WWF1 131 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 SMIM10Q96HG1 83 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 OR4K3Q96R72 315 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 HAUS8Q9BT25 410 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 AICDAQ9GZX7 198 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 LACRTQ9GZZ8 138 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 ZNF703Q9H7S9 590 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-203ENST00000380748 ZNF629Q9UEG4 869 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-203ENST00000380748 TRPS1Q9UHF7 1281 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 PCDHGB3Q9Y5G1 929 aa15.99■□□□□ 0.15
HMGN1-203ENST00000380748 CTAGE9A4FU28 777 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 SMPD2O60906 423 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 GOSR1O95249 250 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 FTCDO95954 541 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 TRPC1P48995 793 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 AGFG1P52594 562 aaKnown RBP15.98■□□□□ 0.15
HMGN1-203ENST00000380748 BASP1P80723 227 aaKnown RBP15.98■□□□□ 0.15
HMGN1-203ENST00000380748 SORDQ00796 357 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 SLC13A2Q13183 592 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 CTBP1Q13363 440 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 BMPR2Q13873 1038 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 PHKG1Q16816 387 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 CLNKQ7Z7G1 428 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 ZNF321PQ8N8H1 164 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 ANKRD53Q8N9V6 530 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 SNF8Q96H20 258 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 SGCZQ96LD1 299 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 BDH2Q9BUT1 245 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 CCDC68Q9H2F9 335 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 ADAP2Q9NPF8 381 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 PRTFDC1Q9NRG1 225 aa15.98■□□□□ 0.15
HMGN1-203ENST00000380748 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.98■□□□□ 0.15
HMGN1-203ENST00000380748 MYOCOSA0A1B0GUC4 107 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 BTNL10A8MVZ5 291 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 EEF1E1-BLOC1S5C9J1V9 151 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 EEF1E1O43324 174 aaKnown RBP15.97■□□□□ 0.15
HMGN1-203ENST00000380748 EPPINO95925 133 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 CYLC1P35663 651 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-203ENST00000380748 RUNX2Q13950 521 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 TOR1AIP1Q5JTV8 583 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 ADGRD1Q6QNK2 874 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 YTHDF3Q7Z739 585 aaKnown RBP15.97■□□□□ 0.15
HMGN1-203ENST00000380748 LRRC75A-AS1Q8N1F1 130 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 TBC1D19Q8N5T2 526 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 FAM47BQ8NA70 645 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 NEIL3Q8TAT5 605 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 EPB41L4BQ9H329 900 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 PARVBQ9HBI1 364 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 REXO2Q9Y3B8 237 aaKnown RBP15.97■□□□□ 0.15
HMGN1-203ENST00000380748 CUBNO60494 3623 aa15.97■□□□□ 0.15
HMGN1-203ENST00000380748 A0A0G2JN53 185 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 URADA6NGE7 173 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 LRRC3CA6NJW4 275 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 MIF4GDA9UHW6 222 aaKnown RBP15.96■□□□□ 0.15
HMGN1-203ENST00000380748 AP3B1O00203 1094 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 NRDCO43847 1150 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 C8BP07358 591 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 C8GP07360 202 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 TIMP3P35625 211 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 AHRP35869 848 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 HSD17B7P56937 341 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 BTN3A2P78410 334 aa15.96■□□□□ 0.15
HMGN1-203ENST00000380748 CCZ1BP86790 482 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms