RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ACTR10Q9NZ32 417 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 RPS6KA6Q9UK32 745 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 MAP4K5Q9Y4K4 846 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 SNX8Q9Y5X2 465 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 KIR2DS5A0A0G2JLQ3 304 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 A0A0G2JNG1 304 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 DPPA5A6NC42 116 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 OR5K4A6NMS3 321 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 KIR2DS3K7RE56 304 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 SMNDC1O75940 238 aaKnown RBP eCLIP18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 UQCRC2P22695 453 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 ATP5A1P25705 553 aaKnown RBP18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 RGS19P49795 217 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 TXNL4AP83876 142 aaKnown RBP18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 SPIDRQ14159 915 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 KIR2DS5Q14953 304 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 TRIM40Q6P9F5 258 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 VN1R4Q7Z5H5 301 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 PARGQ86W56 976 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 C11orf65Q8NCR3 313 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 FAM174AQ8TBP5 190 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 OR5P2Q8WZ92 322 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 TFAP2CQ92754 450 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 C1GALT1Q9NS00 363 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 EML5Q05BV3 1969 aa18.86■□□□□ 0.61
PDLIM5-205ENST00000380180 OR2A25A4D2G3 310 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 METTL12A8MUP2 240 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 GNGT2O14610 69 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 TNFSF14O43557 240 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 DRD2P14416 443 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 HOXB6P17509 224 aaKnown RBP18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 DDX5P17844 614 aaKnown RBP18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 PCGF2P35227 344 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 FRKP42685 505 aaPredicted RBP18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 BLKP51451 505 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 ARFIP1P53367 373 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 RAB8AP61006 207 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 FADDQ13158 208 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 OTUD3Q5T2D3 398 aaPredicted RBP18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 CBLL1Q75N03 491 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 SRFBP1Q8NEF9 429 aaKnown RBP18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 ZNF764Q96H86 408 aaPredicted RBP18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 NELL2Q99435 816 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 TAS2R7Q9NYW3 318 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 ASB4Q9Y574 426 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 MAGED1Q9Y5V3 778 aaPredicted RBP18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 SNX11Q9Y5W9 270 aa18.85■□□□□ 0.61
PDLIM5-205ENST00000380180 WASHC1A8K0Z3 465 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 KRT75O95678 551 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 WNT1P04628 370 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 JUNDP17535 347 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 RPS9P46781 194 aaKnown RBP18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 IST1P53990 364 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 STXBP1P61764 594 aaKnown RBP18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 MRM1Q6IN84 353 aaKnown RBP18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 ISLR2Q6UXK2 745 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 EIF3MQ7L2H7 374 aaKnown RBP18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 CARM1Q86X55 608 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 ZDHHC21Q8IVQ6 265 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 ZCCHC7Q8N3Z6 543 aaKnown RBP18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 KCT2Q8NC54 265 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 NLNQ9BYT8 704 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 EPS8L2Q9H6S3 715 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 NINQ8N4C6 2090 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 PLOD2O00469 737 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 MAP3K13O43283 966 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 PRKRAO75569 313 aaKnown RBP18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 GCM2O75603 506 aaPredicted RBP18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 CD27P26842 260 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 MAOBP27338 520 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 AQP1P29972 269 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 MAGEA2P43356 314 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 PRIM2P49643 509 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 CRYBA2P53672 197 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 MERTKQ12866 999 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 HSPB3Q12988 150 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 TEAD4Q15561 434 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 GCNT6Q5T4J0 391 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 FCRL6Q6DN72 434 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 OR52E8Q6IFG1 317 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 VTCN1Q7Z7D3 282 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 STK32CQ86UX6 486 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 FAM46DQ8NEK8 389 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 GUCD1Q96NT3 240 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 FAIM2Q9BWQ8 316 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 IL1RAPQ9NPH3 570 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 ATG4BQ9Y4P1 393 aa18.84■□□□□ 0.61
PDLIM5-205ENST00000380180 GLOD5A6NK44 160 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 G3V2T6 193 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 CTSVO60911 334 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 CERS1P27544 350 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 MYBPC1Q00872 1141 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 FIGLAQ6QHK4 219 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 FKBP9P1Q75LS8 142 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 ASPGQ86U10 573 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 DCP2Q8IU60 420 aaKnown RBP18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 ZDHHC13Q8IUH4 622 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 ADHFE1Q8IWW8 467 aa18.83■□□□□ 0.61
PDLIM5-205ENST00000380180 ZBED6CLQ96FA7 236 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms