RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 C16orf47Q6ZP98 133 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-202ENST00000377612 TBC1D1Q86TI0 1168 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-202ENST00000377612 CHERPQ8IWX8 916 aaKnown RBP16.66■□□□□ 0.26
COMMD6-202ENST00000377612 NOA1Q8NC60 698 aaKnown RBP16.66■□□□□ 0.26
COMMD6-202ENST00000377612 THAP3Q8WTV1 239 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-202ENST00000377612 NCLNQ969V3 563 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 GPR78Q96P69 363 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 SORBS1Q9BX66 1292 aaKnown RBP16.66■□□□□ 0.26
COMMD6-202ENST00000377612 TRIM45Q9H8W5 580 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-202ENST00000377612 NMRAL1Q9HBL8 299 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 PNO1Q9NRX1 252 aaKnown RBP16.66■□□□□ 0.26
COMMD6-202ENST00000377612 KCMF1Q9P0J7 381 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 NINQ8N4C6 2090 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 LRBAP50851 2863 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 TMEM200CA6NKL6 621 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 K7EPI3 171 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 SLC25A12O75746 678 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 ALDOAP04075 364 aaKnown RBP16.65■□□□□ 0.26
COMMD6-202ENST00000377612 C2P06681 752 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 CD46P15529 392 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 CRABP2P29373 138 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 EEF1DP29692 281 aaKnown RBP16.65■□□□□ 0.26
COMMD6-202ENST00000377612 ECHS1P30084 290 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 TRHRP34981 398 aaPredicted RBP16.65■□□□□ 0.26
COMMD6-202ENST00000377612 CA7P43166 264 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 PER3P56645 1201 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 HSD17B7P56937 341 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 PCDH1Q08174 1060 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 SETDB1Q15047 1291 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 TERF2Q15554 542 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.65■□□□□ 0.26
COMMD6-202ENST00000377612 LAS2Q8IYD9 372 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 CPSF7Q8N684 471 aaKnown RBP16.65■□□□□ 0.26
COMMD6-202ENST00000377612 ZNF321PQ8N8H1 164 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 CCDC120Q96HB5 630 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 GPR137Q96N19 417 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 MAPKAP1Q9BPZ7 522 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 OPTCQ9UBM4 332 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 DMGDHQ9UI17 866 aaKnown RBP16.65■□□□□ 0.26
COMMD6-202ENST00000377612 SH3BGRL2Q9UJC5 107 aa16.65■□□□□ 0.26
COMMD6-202ENST00000377612 TRGV8A0A0C4DH27 118 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 A0A1B0GUH1 482 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 SCELO95171 688 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 ATP5A1P25705 553 aaKnown RBP16.64■□□□□ 0.25
COMMD6-202ENST00000377612 HSF1Q00613 529 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 SLC13A2Q13183 592 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 LAPTM5Q13571 262 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 NAA30Q147X3 362 aaPredicted RBP16.64■□□□□ 0.25
COMMD6-202ENST00000377612 C3AR1Q16581 482 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 PAGE2BQ5JRK9 111 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 GRHL2Q6ISB3 625 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 SLC25A25Q6KCM7 469 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 ZNF595Q8IYB9 648 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 PLD6Q8N2A8 252 aaKnown RBP16.64■□□□□ 0.25
COMMD6-202ENST00000377612 TMEM178AQ8NBL3 297 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 ADAMTS18Q8TE60 1221 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 ITLN2Q8WWU7 325 aaPredicted RBP16.64■□□□□ 0.25
COMMD6-202ENST00000377612 SREK1Q8WXA9 508 aaKnown RBP16.64■□□□□ 0.25
COMMD6-202ENST00000377612 VMP1Q96GC9 406 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 DEFB126Q9BYW3 111 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 CDC42EP4Q9H3Q1 356 aaKnown RBP16.64■□□□□ 0.25
COMMD6-202ENST00000377612 ACSS3Q9H6R3 686 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 COPS7BQ9H9Q2 264 aaPredicted RBP16.64■□□□□ 0.25
COMMD6-202ENST00000377612 ADAP2Q9NPF8 381 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 TINAGQ9UJW2 476 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 ACOT9Q9Y305 439 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 ABCA12Q86UK0 2595 aa16.64■□□□□ 0.25
COMMD6-202ENST00000377612 FBN2P35556 2912 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 A0A087X1B8 175 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 A0A096LPK6 155 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 NPIPA5E9PKD4 350 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 SAP18O00422 153 aaKnown RBP16.63■□□□□ 0.25
COMMD6-202ENST00000377612 KLK8O60259 260 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 URI1O94763 535 aaPredicted RBP16.63■□□□□ 0.25
COMMD6-202ENST00000377612 TGFB1P01137 390 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 PCNAP12004 261 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 HLCSP50747 726 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 CLCN2P51788 898 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 ALDH6A1Q02252 535 aaKnown RBP16.63■□□□□ 0.25
COMMD6-202ENST00000377612 ID2Q02363 134 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 UAP1Q16222 522 aaPredicted RBP16.63■□□□□ 0.25
COMMD6-202ENST00000377612 TECRLQ5HYJ1 363 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 FAM219BQ5XKK7 198 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 MED27Q6P2C8 311 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 FGD2Q7Z6J4 655 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 ACOT4Q8N9L9 421 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 OR7G3Q8NG95 312 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 RHEBL1Q8TAI7 183 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 KCNC2Q96PR1 638 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 ZNF717Q9BY31 904 aaPredicted RBP16.63■□□□□ 0.25
COMMD6-202ENST00000377612 FUT8Q9BYC5 575 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 LIN28AQ9H9Z2 209 aaKnown RBP16.63■□□□□ 0.25
COMMD6-202ENST00000377612 LYRM4Q9HD34 91 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 ZNF358Q9NW07 568 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 NPIPA1Q9UND3 350 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 ZNF835Q9Y2P0 537 aa16.63■□□□□ 0.25
COMMD6-202ENST00000377612 APCP25054 2843 aa16.62■□□□□ 0.25
COMMD6-202ENST00000377612 A0A088AWK7 358 aa16.62■□□□□ 0.25
COMMD6-202ENST00000377612 SLC19A2O60779 497 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms