RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 RCN2Q14257 317 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 HIST2H2ACQ16777 129 aaPredicted RBP19.62■□□□□ 0.73
VSX1-201ENST00000376707 HIST2H2AA3Q6FI13 130 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 ADNP2Q6IQ32 1131 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 ABHD17CQ6PCB6 329 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 VN1R5Q7Z5H4 357 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 CCDC25Q86WR0 208 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 CYP4Z2PQ8N1L4 340 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 PDPRQ8NCN5 879 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 TMEM52Q8NDY8 209 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 EXT2Q93063 718 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 NCLNQ969V3 563 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 KIAA1191Q96A73 305 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 ADAP2Q9NPF8 381 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 RNF112Q9ULX5 631 aa19.62■□□□□ 0.73
VSX1-201ENST00000376707 PPIEQ9UNP9 301 aaKnown RBP19.62■□□□□ 0.73
VSX1-201ENST00000376707 SYNDIG1LA6NDD5 238 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 KLRC4-KLRK1H3BQV0 150 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 TGFBR3LH3BV60 316 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 TFECO14948 347 aaPredicted RBP19.61■□□□□ 0.73
VSX1-201ENST00000376707 ZNHIT1O43257 154 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 CCNT2O60583 730 aaKnown RBP19.61■□□□□ 0.73
VSX1-201ENST00000376707 PRAMEF4O60810 478 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 TBX6O95947 436 aaPredicted RBP19.61■□□□□ 0.73
VSX1-201ENST00000376707 COX6B1P14854 86 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 LIM2P55344 173 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 CKAP4Q07065 602 aaKnown RBP19.61■□□□□ 0.73
VSX1-201ENST00000376707 NAB1Q13506 487 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 LAPTM5Q13571 262 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 PAGE2BQ5JRK9 111 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 PRAMEF9Q5VWM5 478 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 CLNKQ7Z7G1 428 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 SULF2Q8IWU5 870 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 PPM1NQ8N819 430 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 FBF1Q8TES7 1133 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 AGAP11Q8TF27 550 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 WDR34Q96EX3 536 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 ZNF223Q9UK11 482 aaPredicted RBP19.61■□□□□ 0.73
VSX1-201ENST00000376707 PTBP2Q9UKA9 531 aaKnown RBP19.61■□□□□ 0.73
VSX1-201ENST00000376707 ZNF490Q9ULM2 529 aaPredicted RBP19.61■□□□□ 0.73
VSX1-201ENST00000376707 DAPP1Q9UN19 280 aa19.61■□□□□ 0.73
VSX1-201ENST00000376707 PRRG2O14669 202 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 PEX1O43933 1283 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 FAM155BO75949 473 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 ZFAND5O76080 213 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 IFNA16P05015 189 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 SNRPB2P08579 225 aaKnown RBP19.6■□□□□ 0.73
VSX1-201ENST00000376707 SLC35E2BP0CK96 405 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 PTGER4P35408 488 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 RFC3P40938 356 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 SSR4P51571 173 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 IRF8Q02556 426 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 BMPR2Q13873 1038 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 ELAVL1Q15717 326 aaKnown RBP19.6■□□□□ 0.73
VSX1-201ENST00000376707 EID3Q8N140 333 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 TMEM132CQ8N3T6 1108 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 F2RL3Q96RI0 385 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 CSF3RQ99062 836 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 ROGDIQ9GZN7 287 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 ZDHHC18Q9NUE0 388 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 ERVK-11Q9UQG0 969 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 YARS2Q9Y2Z4 477 aaKnown RBP19.6■□□□□ 0.73
VSX1-201ENST00000376707 CLDN16Q9Y5I7 305 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 CLCA3PQ9Y6N3 262 aa19.6■□□□□ 0.73
VSX1-201ENST00000376707 CYR61O00622 381 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 CTNSO60931 367 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 CLDN14O95500 239 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 TFEBP19484 476 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 CD22P20273 847 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 CRABP2P29373 138 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 PTGER1P34995 402 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 KCNC1P48547 511 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 GPR143P51810 404 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 STX4Q12846 297 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 CHIT1Q13231 466 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 SLMAPQ14BN4 828 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 EFTUD2Q15029 972 aaKnown RBP eCLIP19.59■□□□□ 0.73
VSX1-201ENST00000376707 RAPH1Q70E73 1250 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 LRRC70Q7Z2Q7 622 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 GDF7Q7Z4P5 450 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 MDGA2Q7Z553 956 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 ISCA2Q86U28 154 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 DOLPP1Q86YN1 238 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 CHERPQ8IWX8 916 aaKnown RBP19.59■□□□□ 0.73
VSX1-201ENST00000376707 SRFBP1Q8NEF9 429 aaKnown RBP19.59■□□□□ 0.73
VSX1-201ENST00000376707 STAG3L4Q8TBR4 150 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 KCNC2Q96PR1 638 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 PHF12Q96QT6 1004 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 CD244Q9BZW8 370 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 ALG9Q9H6U8 611 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 TIMMDC1Q9NPL8 285 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 ASB1Q9Y576 335 aa19.59■□□□□ 0.73
VSX1-201ENST00000376707 ESYT3A0FGR9 886 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 MSH2P43246 934 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 GPR85P60893 370 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 SLC7A5Q01650 507 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 TBCCQ15814 346 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 C8orf74Q6P047 294 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 C3P1Q6ZMU1 363 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 NCCRP1Q6ZVX7 275 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms