RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CELF2-AS1Q8N7Q2 184 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 TFGQ92734 400 aaPredicted RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 CHFRQ96EP1 664 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 ACAT2Q9BWD1 397 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 CHST8Q9H2A9 424 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 CPNE5Q9HCH3 593 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 TMEFF2Q9UIK5 374 aaPredicted RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 VPS4AQ9UN37 437 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 CFAP20Q9Y6A4 193 aaKnown RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 COL4A3Q01955 1670 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 RNASET2O00584 256 aaKnown RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 SSX4O60224 188 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 UPK1BO75841 260 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 PCDH8O95206 1070 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 FKBP9O95302 570 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 KLK1P06870 262 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 KELP23276 732 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 ISL1P61371 349 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 CDK3Q00526 305 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 VEZF1Q14119 521 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 RGNQ15493 299 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 COLEC12Q5KU26 742 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 C10orf62Q5T681 223 aaPredicted RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 RSBN1Q5VWQ0 802 aaPredicted RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 OR2T5Q6IEZ7 315 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 SHQ1Q6PI26 577 aaKnown RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 EIF3MQ7L2H7 374 aaKnown RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 NAGSQ8N159 534 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 OR2T29Q8NH02 315 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 C16orf78Q8WTQ4 265 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 BHLHE41Q9C0J9 482 aaPredicted RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 ERVK-18Q9QC07 812 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 N6AMT1Q9Y5N5 214 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 STON1Q9Y6Q2 735 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 SEMG1P04279 462 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 PRKCAP17252 672 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 PBX2P40425 430 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 CASP9P55211 416 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 VLDLRP98155 873 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 FCHO2Q0JRZ9 810 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 CAMK2GQ13555 558 aaPredicted RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 LAPTM4AQ15012 233 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 CCDC81Q6ZN84 652 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 CEP68Q76N32 757 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 LRRTM4Q86VH4 590 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 METTL4Q8N3J2 472 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 MAL2Q969L2 176 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 CXorf40BQ96DE9 158 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 HSH2DQ96JZ2 352 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 MOV10Q9HCE1 1003 aaKnown RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 TM9SF3Q9HD45 589 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 C3orf18Q9UK00 162 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 LOC100130705A0A1B0GUX0 176 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 MYO1GB0I1T2 1018 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 IDH3BO43837 385 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 MITFO75030 526 aaPredicted RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 FABP3P05413 133 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 FURINP09958 794 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 PPIBP23284 216 aaKnown RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 PIK3CBP42338 1070 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 HBA1P69905 142 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 RPA4Q13156 261 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 LAIR1Q6GTX8 287 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 LCTLQ6UWM7 567 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 TMIGD1Q6UXZ0 262 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 ZNF852Q6ZMS4 543 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 VN1R5Q7Z5H4 357 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 YAF2Q8IY57 180 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 CIDECQ96AQ7 238 aaPredicted RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 ZNF300Q96RE9 604 aaPredicted RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 SP140LQ9H930 580 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 MBNL1Q9NR56 388 aaKnown RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 SPASTQ9UBP0 616 aa13.36□□□□□ -0.27
MSH5-202ENST00000375740 ZNF282Q9UDV7 671 aaPredicted RBP13.36□□□□□ -0.27
MSH5-202ENST00000375740 TAF4O00268 1085 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 SLC22A1O15245 554 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 CCNKO75909 580 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 MFN2O95140 757 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 C6orf47O95873 294 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 TAS2R50P59544 299 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 PRSS53Q2L4Q9 553 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 METRNLQ641Q3 311 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 CYP4Z1Q86W10 505 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 DCUN1D3Q8IWE4 304 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 TBC1D20Q96BZ9 403 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 TPD52L3Q96J77 140 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 SPATA9Q9BWV2 254 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 SORBS1Q9BX66 1292 aaKnown RBP13.35□□□□□ -0.27
MSH5-202ENST00000375740 CORO2BQ9UQ03 480 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 TRPM6Q9BX84 2022 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 DOCK9Q9BZ29 2069 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 PTX3P26022 381 aaPredicted RBP13.35□□□□□ -0.27
MSH5-202ENST00000375740 ACVR2AP27037 513 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 AQP1P29972 269 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 FMO3P31513 532 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 CRYBA2P53672 197 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 CST6Q15828 149 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 MPEG1Q2M385 716 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 COX20Q5RI15 118 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 AGBL4Q5VU57 503 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms