RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SLC17A7Q9P2U7 560 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 OPTCQ9UBM4 332 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 ZNF835Q9Y2P0 537 aa11.45□□□□□ -0.58
LSM2-208ENST00000375661 TNPO3Q9Y5L0 923 aaKnown RBP11.45□□□□□ -0.58
LSM2-208ENST00000375661 FEZF1A0PJY2 475 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 TXNDC9O14530 226 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 LCMT2O60294 686 aaKnown RBP11.44□□□□□ -0.58
LSM2-208ENST00000375661 F10P00742 488 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 C1GALT1C1LP0DN25 315 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 ITGAMP11215 1152 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 EZRP15311 586 aaKnown RBP11.44□□□□□ -0.58
LSM2-208ENST00000375661 CD22P20273 847 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 ETV4P43268 484 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 PCDH1Q08174 1060 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 GTF2H2Q13888 395 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 E2F2Q14209 437 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 PCOLCEQ15113 449 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 C3AR1Q16581 482 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 PDK4Q16654 411 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 UNC50Q53HI1 259 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 ZNF766Q5HY98 468 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 ZNF678Q5SXM1 525 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 AGBL2Q5U5Z8 902 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 GTF2H2CQ6P1K8 395 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 METTL2BQ6P1Q9 378 aaKnown RBP11.44□□□□□ -0.58
LSM2-208ENST00000375661 GOLGA7Q7Z5G4 137 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 TMPRSS11BQ86T26 416 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 ZNF740Q8NDX6 193 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 ARMC2Q8NEN0 867 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 RDH11Q8TC12 318 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 WDR34Q96EX3 536 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 MAGED4Q96JG8 741 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 GPR137Q96N19 417 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 NSUN5Q96P11 429 aaKnown RBP11.44□□□□□ -0.58
LSM2-208ENST00000375661 TMEM237Q96Q45 408 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 SARGQ9BW04 601 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 ZBTB26Q9HCK0 441 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 STMN3Q9NZ72 180 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 SH3BGRL2Q9UJC5 107 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 PCTPQ9UKL6 214 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 CELSR1Q9NYQ6 3014 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 HIVEP1P15822 2718 aa11.44□□□□□ -0.58
LSM2-208ENST00000375661 AKAP9Q99996 3911 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 KCNE1BA0A087WTH5 132 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 GOLGA6L10A6NI86 522 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 H0YGG7 62 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 PPP6CO00743 305 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 OR7A17O14581 309 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 CLGNO14967 610 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 CELA2AP08217 269 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 MYL2P10916 166 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 CPA3P15088 417 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 EPB42P16452 691 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 IMPDH1P20839 514 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 BCL6P41182 706 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 CASP2P42575 452 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 SCTRP47872 440 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 ARF3P61204 181 aaPredicted RBP11.43□□□□□ -0.58
LSM2-208ENST00000375661 MAGOHP61326 146 aaKnown RBP11.43□□□□□ -0.58
LSM2-208ENST00000375661 HERVK_113P63132 956 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 REEP5Q00765 189 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 ZNF33BQ06732 778 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 CHIT1Q13231 466 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 FAM53BQ14153 422 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 DOC2AQ14183 400 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 SLBPQ14493 270 aaKnown RBP eCLIP11.43□□□□□ -0.58
LSM2-208ENST00000375661 PCLAFQ15004 111 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 TBCCQ15814 346 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 TTMPQ5BVD1 217 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 VN1R4Q7Z5H5 301 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 SPPL2CQ8IUH8 684 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 SLC22A9Q8IVM8 553 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 CSNK1A1LQ8N752 337 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 AMER3Q8N944 861 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 CCDC63Q8NA47 563 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 MFSD9Q8NBP5 474 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 ADAMTS18Q8TE60 1221 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 ZNF483Q8TF39 744 aaPredicted RBP11.43□□□□□ -0.58
LSM2-208ENST00000375661 PHF10Q8WUB8 498 aaKnown RBP11.43□□□□□ -0.58
LSM2-208ENST00000375661 CHTF18Q8WVB6 975 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 L3HYPDHQ96EM0 354 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 MMABQ96EY8 250 aaPredicted RBP11.43□□□□□ -0.58
LSM2-208ENST00000375661 ZNF354BQ96LW1 612 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 YIPF2Q9BWQ6 316 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 ERVK-6Q9BXR3 956 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 IQCGQ9H095 443 aaKnown RBP11.43□□□□□ -0.58
LSM2-208ENST00000375661 ENKD1Q9H0I2 346 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 STMN4Q9H169 189 aaPredicted RBP11.43□□□□□ -0.58
LSM2-208ENST00000375661 EHD1Q9H4M9 534 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 OXSMQ9NWU1 459 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 RUVBL1Q9Y265 456 aaKnown RBP11.43□□□□□ -0.58
LSM2-208ENST00000375661 MEMO1Q9Y316 297 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 ANGPTL3Q9Y5C1 460 aa11.43□□□□□ -0.58
LSM2-208ENST00000375661 DCHS2Q6V1P9 2916 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 A0A1B0GTL3 188 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 TRBC2A0A5B9 178 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 ASPDHA6ND91 283 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 C19orf84I3L1E1 186 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 CDK2AP1O14519 115 aa11.42□□□□□ -0.58
LSM2-208ENST00000375661 C8orf89P0DMQ9 161 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms