RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SFT2D3Q587I9 215 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 JMJD6Q6NYC1 403 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-201ENST00000373554 PAPD4Q6PIY7 484 aaKnown RBP11.3□□□□□ -0.6
HDAC8-201ENST00000373554 UBE3DQ7Z6J8 389 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 TRABD2AQ86V40 505 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 SRRM1Q8IYB3 904 aaKnown RBP11.3□□□□□ -0.6
HDAC8-201ENST00000373554 ZNF595Q8IYB9 648 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 RNF175Q8N4F7 328 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 ACOT4Q8N9L9 421 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 WDR20Q8TBZ3 569 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 TRPC4APQ8TEL6 797 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 APOPT1Q96IL0 206 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 ZNF382Q96SR6 550 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 EPS8L2Q9H6S3 715 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 LYRM4Q9HD34 91 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 MKS1Q9NXB0 559 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 PSD3Q9NYI0 1048 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 PPT2Q9UMR5 302 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 SNX6Q9UNH7 406 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 MED13Q9UHV7 2174 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 IGKV3D-11A0A0A0MRZ8 115 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 TCRBV16S1A1N1A0A5B0 115 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 SYNDIG1LA6NDD5 238 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 G3V2L1 256 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 PLPP1O14494 284 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 OR4F21O95013 312 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 SEMA3DO95025 777 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 CPA3P15088 417 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 MAOAP21397 527 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 CASRP41180 1078 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 NEK2P51955 445 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 HSD17B7P56937 341 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 NAA20P61599 178 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 BTG2P78543 158 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 SLC18A2Q05940 514 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 LCP2Q13094 533 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 EXT1Q16394 746 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 CRB2Q5IJ48 1285 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 PLAG1Q6DJT9 500 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 OR4C11Q6IEV9 310 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 LETMD1Q6P1Q0 360 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 ISLR2Q6UXK2 745 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 ZNF793Q6ZN11 406 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 GPRIN3Q6ZVF9 776 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 NUDT13Q86X67 352 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 ZADH2Q8N4Q0 377 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 CCNYL1Q8N7R7 359 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 MYRIPQ8NFW9 859 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 IMMP1LQ96LU5 166 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 SMC6Q96SB8 1091 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 CSF3RQ99062 836 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 SERPINI1Q99574 410 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 TMEM109Q9BVC6 243 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 PRTFDC1Q9NRG1 225 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 PHF11Q9UIL8 331 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 ZNF462Q96JM2 2506 aa11.29□□□□□ -0.6
HDAC8-201ENST00000373554 A0A1B0GTL3 188 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 BLACEA4D250 179 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 CCDC151A5D8V7 595 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 PPP6CO00743 305 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 ERLIN1O75477 346 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 KRT6AP02538 564 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 KRT6BP04259 564 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 ENO1P06733 434 aaKnown RBP11.28□□□□□ -0.6
HDAC8-201ENST00000373554 CPN2P22792 545 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 HMOX2P30519 316 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 KRT6CP48668 564 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 PKNOX1P55347 436 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 SLAMF1Q13291 335 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 KRT71Q3SY84 523 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 SGO1Q5FBB7 561 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 CFAP157Q5JU67 520 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 CYP20A1Q6UW02 462 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 IGFL3Q6UXB1 125 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 LINC00696Q6ZRV3 163 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 SCUBE1Q8IWY4 988 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 ZCCHC7Q8N3Z6 543 aaKnown RBP11.28□□□□□ -0.6
HDAC8-201ENST00000373554 SIRT6Q8N6T7 355 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 CDYL2Q8N8U2 506 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 BRIX1Q8TDN6 353 aaKnown RBP11.28□□□□□ -0.6
HDAC8-201ENST00000373554 SELENOMQ8WWX9 145 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 MTFMTQ96DP5 389 aaKnown RBP11.28□□□□□ -0.6
HDAC8-201ENST00000373554 MAPKAP1Q9BPZ7 522 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 WDR77Q9BQA1 342 aaPredicted RBP11.28□□□□□ -0.6
HDAC8-201ENST00000373554 SORBS1Q9BX66 1292 aaKnown RBP11.28□□□□□ -0.6
HDAC8-201ENST00000373554 SLC29A3Q9BZD2 475 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 GSTO2Q9H4Y5 243 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 NECTIN3Q9NQS3 549 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 NMRK1Q9NWW6 199 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 MS4A12Q9NXJ0 267 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 AHSPQ9NZD4 102 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 SENP1Q9P0U3 644 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 PTGFRNQ9P2B2 879 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 TEKT2Q9UIF3 430 aa11.28□□□□□ -0.6
HDAC8-201ENST00000373554 TNRC6AQ8NDV7 1962 aaKnown RBP11.27□□□□□ -0.61
HDAC8-201ENST00000373554 SAGE2PA6NJ88 616 aa11.27□□□□□ -0.61
HDAC8-201ENST00000373554 H3BQF6 201 aa11.27□□□□□ -0.61
HDAC8-201ENST00000373554 CYR61O00622 381 aa11.27□□□□□ -0.61
HDAC8-201ENST00000373554 RGS16O15492 202 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms