RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 NPRL3Q12980 569 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 ERICH5Q6P6B1 374 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 KIAA1324Q6UXG2 1013 aaKnown RBP11.21□□□□□ -0.62
PDE6C-201ENST00000371447 SLC9B2Q86UD5 537 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 CHCHD4Q8N4Q1 142 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 HORMAD2Q8N7B1 307 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 LZICQ8WZA0 190 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 PHOX2BQ99453 314 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 SGPP1Q9BX95 441 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 RHBGQ9H310 441 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 TRIT1Q9H3H1 467 aaKnown RBP11.21□□□□□ -0.62
PDE6C-201ENST00000371447 WDR70Q9NW82 654 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 DOLKQ9UPQ8 538 aa11.21□□□□□ -0.62
PDE6C-201ENST00000371447 LOC100506127A0A0U1RQW1 187 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 ERI3O43414 337 aaKnown RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 APODP05090 189 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 C7P10643 843 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 HOXB9P17482 250 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 PTX3P26022 381 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 NFATC3Q12968 1075 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 CLCA4Q14CN2 919 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 FAM46CQ5VWP2 391 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 TRIM40Q6P9F5 258 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 BORAQ6PGQ7 559 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 CCDC71Q8IV32 467 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 CLIP4Q8N3C7 705 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 OR10G6Q8NH81 332 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 GIPC3Q8TF64 312 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 PHF10Q8WUB8 498 aaKnown RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 HDAC2Q92769 488 aaKnown RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 TSACCQ96A04 125 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 C19orf43Q9BQ61 176 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 IMPAD1Q9NX62 359 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 DENND4CQ5VZ89 1909 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 POM121BA6NF01 834 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 PRAMEF25A6NGN4 478 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 SLC28A2O43868 658 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 C9P02748 559 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 EIF2S1P05198 315 aaKnown RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 PRPH2P23942 346 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 KRT20P35900 424 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 NCS1P62166 190 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 DLX2Q07687 328 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 ITGADQ13349 1161 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 AGBL4Q5VU57 503 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 KLHL35Q6PF15 583 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 CCDC116Q8IYX3 515 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 DNAJB8Q8NHS0 232 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 C17orf50Q8WW18 174 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 ZNF514Q96K75 400 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 COL21A1Q96P44 957 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 APOL4Q9BPW4 351 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 EPS8L2Q9H6S3 715 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 MAGIXQ9H6Y5 334 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 SLC28A3Q9HAS3 691 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 C11orf16Q9NQ32 467 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 C8orf4Q9NR00 106 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 GALNT8Q9NY28 637 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 TUBA8Q9NY65 449 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 SPHK1Q9NYA1 384 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 PSMD11O00231 422 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 NDUFS4O43181 175 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 GPR37L1O60883 481 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 NDUFS2O75306 463 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 CCR8P51685 355 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 MLLT10P55197 1068 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 SELENOWP63302 87 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 DBPQ10586 325 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 BCL7AQ4VC05 210 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 IFI44LQ53G44 452 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 SOWAHCQ53LP3 525 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 PERM1Q5SV97 790 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 KHDRBS2Q5VWX1 349 aaKnown RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 ZNF761Q86XN6 746 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 TMEFF1Q8IYR6 380 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 OR13F1Q8NGS4 319 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 RNF31Q96EP0 1072 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 C11orf24Q96F05 449 aaPredicted RBP11.2□□□□□ -0.62
PDE6C-201ENST00000371447 WFDC6Q9BQY6 131 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 SFXN1Q9H9B4 322 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 AP3M1Q9Y2T2 418 aa11.2□□□□□ -0.62
PDE6C-201ENST00000371447 H3BN98 237 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 M0R3G1 203 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 RNASET2O00584 256 aaKnown RBP11.19□□□□□ -0.62
PDE6C-201ENST00000371447 FRS3O43559 492 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 PRMT3O60678 531 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 BCAS1O75363 584 aaPredicted RBP11.19□□□□□ -0.62
PDE6C-201ENST00000371447 KLHL18O94889 574 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 HPRP00739 348 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 OR12D1P0DN82 309 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 RFX3P48380 749 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 DSTNP60981 165 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 ID2Q02363 134 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 AQP6Q13520 282 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 MAPK11Q15759 364 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 RBM48Q5RL73 367 aaKnown RBP11.19□□□□□ -0.62
PDE6C-201ENST00000371447 KIAA1614Q5VZ46 1190 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 FAM71E1Q6IPT2 247 aa11.19□□□□□ -0.62
PDE6C-201ENST00000371447 BCDIN3DQ7Z5W3 292 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms