RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ARHGAP10A1A4S6 786 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 BIRC5O15392 142 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 CHEK2O96017 543 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 SERPINB5P36952 375 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 FOXA1P55317 472 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 RUNX2Q13950 521 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 CLEC6AQ6EIG7 209 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 LANCL3Q6ZV70 420 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 PAGE2Q7Z2X7 111 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 ZCCHC7Q8N3Z6 543 aaKnown RBP13.97□□□□□ -0.17
COL9A1-204ENST00000370496 GBP7Q8N8V2 638 aaPredicted RBP13.97□□□□□ -0.17
COL9A1-204ENST00000370496 TMEM102Q8N9M5 508 aaPredicted RBP13.97□□□□□ -0.17
COL9A1-204ENST00000370496 CSF3RQ99062 836 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 ING2Q9H160 280 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 ACBD3Q9H3P7 528 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 LYARQ9NX58 379 aaKnown RBP13.97□□□□□ -0.17
COL9A1-204ENST00000370496 PHF11Q9UIL8 331 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 FBXW2Q9UKT8 454 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 SCN2AQ99250 2005 aa13.97□□□□□ -0.17
COL9A1-204ENST00000370496 OR2W5A6NFC9 320 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 FAM227AF5H4B4 570 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 CLDN4O14493 209 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 PRMT3O60678 531 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 DNAJB5O75953 348 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 HSPA4LO95757 839 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 CHRNGP07510 517 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 FAM87AP0C7U9 286 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 DHRS4L1P0CG22 281 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 UROSP10746 265 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 CPN2P22792 545 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 EFNA3P52797 238 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 RHAGQ02094 409 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 TNFRSF17Q02223 184 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 ZNF33BQ06732 778 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 SLC13A2Q13183 592 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 NSDHLQ15738 373 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 CHI3L2Q15782 390 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 IMPG1Q17R60 797 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 ARL13AQ5H913 290 aaPredicted RBP13.96□□□□□ -0.17
COL9A1-204ENST00000370496 DCAF10Q5QP82 559 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 KIRREL2Q6UWL6 708 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 QSOX2Q6ZRP7 698 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 APLFQ8IW19 511 aaPredicted RBP13.96□□□□□ -0.17
COL9A1-204ENST00000370496 OR11G2Q8NGC1 345 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 AGR3Q8TD06 166 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 TSLPQ969D9 159 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 ARL8AQ96BM9 186 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 ATP6V1G3Q96LB4 118 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 MAPKAP1Q9BPZ7 522 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 MESP1Q9BRJ9 268 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 TRIM55Q9BYV6 548 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 ACPTQ9BZG2 426 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 PRDM9Q9NQV7 894 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 PRTFDC1Q9NRG1 225 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 G3BP2Q9UN86 482 aaKnown RBP13.96□□□□□ -0.17
COL9A1-204ENST00000370496 MMACHCQ9Y4U1 282 aa13.96□□□□□ -0.17
COL9A1-204ENST00000370496 NBEAQ8NFP9 2946 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 A0A0A6YYD5 115 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 NSG1A0A0A6YYJ2 146 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 AZIN1O14977 448 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 EEDO75530 441 aaKnown RBP13.96□□□□□ -0.18
COL9A1-204ENST00000370496 GBAP04062 536 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 SERPINE1P05121 402 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 COX6A1P12074 109 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 MAOAP21397 527 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 BSGP35613 385 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 BUD31P41223 144 aaPredicted RBP13.96□□□□□ -0.18
COL9A1-204ENST00000370496 SLAMF1Q13291 335 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 KCNAB2Q13303 367 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 MPP2Q14168 576 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 SH2D4BQ5SQS7 431 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 IRAK1BP1Q5VVH5 260 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 TMEM205Q6UW68 189 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 SCIMPQ6UWF3 145 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 COMMD6Q7Z4G1 85 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 ZNF595Q8IYB9 648 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 PTCHD1Q96NR3 888 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 ZNF717Q9BY31 904 aaPredicted RBP13.96□□□□□ -0.18
COL9A1-204ENST00000370496 ZNF160Q9HCG1 818 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 TNFRSF12AQ9NP84 129 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 RIC8BQ9NVN3 520 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 MS4A12Q9NXJ0 267 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 VPS29Q9UBQ0 182 aa13.96□□□□□ -0.18
COL9A1-204ENST00000370496 IGHV1-45A0A0A0MS14 117 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 BLACEA4D250 179 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 TMEM114B3SHH9 223 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 MKRN2OSH3BPM6 223 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 SEC24DO94855 1032 aaPredicted RBP13.95□□□□□ -0.18
COL9A1-204ENST00000370496 HPP00738 406 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 KLK1P06870 262 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 NR2F6P10588 404 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 BGNP21810 368 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 ITGA3P26006 1051 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 SERPINB3P29508 390 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 TLX1P31314 330 aaPredicted RBP13.95□□□□□ -0.18
COL9A1-204ENST00000370496 CCL11P51671 97 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 MAPK12P53778 367 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 HSD17B7P56937 341 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 BTG2P78543 158 aa13.95□□□□□ -0.18
COL9A1-204ENST00000370496 HMGCS1Q01581 520 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms