RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 FIGNL2A6NMB9 653 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 FAM166BA8MTA8 275 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 A8MVJ9 347 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 CLDN4O14493 209 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 FANCGO15287 622 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 B3GALT2O43825 422 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 ZFAND5O76080 213 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 TUBB4AP04350 444 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 IFNA16P05015 189 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 GNAZP19086 355 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 HNMTP50135 292 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 NR0B1P51843 470 aaKnown RBP9.62□□□□□ -0.87
CLRN3-201ENST00000368671 PLA2G16P53816 162 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 HSD17B7P56937 341 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 TAS2R39P59534 338 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 CDKL1Q00532 357 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 MGAT5Q09328 741 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 MORF4L2Q15014 288 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 TERF2Q15554 542 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 TSNQ15631 228 aaKnown RBP9.62□□□□□ -0.87
CLRN3-201ENST00000368671 STEAP4Q687X5 459 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 ARHGAP11AQ6P4F7 1023 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 PAOXQ6QHF9 649 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 IL20RBQ6UXL0 311 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 TMIGD1Q6UXZ0 262 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 SLCO4C1Q6ZQN7 724 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 KLHL7Q8IXQ5 586 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 KLHDC8AQ8IYD2 350 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 KRT78Q8N1N4 520 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 RPRMLQ8N4K4 120 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 PSD4Q8NDX1 1056 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 TTLQ8NG68 377 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 ANKRD49Q8WVL7 239 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 ASB5Q8WWX0 329 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 ASB15Q8WXK1 588 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 RND1Q92730 232 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 SLCO2A1Q92959 643 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 MS4A6EQ96DS6 147 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 CSF3RQ99062 836 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 NPLQ9BXD5 320 aaPredicted RBP9.62□□□□□ -0.87
CLRN3-201ENST00000368671 UCK2Q9BZX2 261 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 TP63Q9H3D4 680 aaPredicted RBP9.62□□□□□ -0.87
CLRN3-201ENST00000368671 COPS7BQ9H9Q2 264 aaPredicted RBP9.62□□□□□ -0.87
CLRN3-201ENST00000368671 MCCC2Q9HCC0 563 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 ADAP2Q9NPF8 381 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 DEPPQ9NTK1 212 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 HPF1Q9NWY4 346 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 SNX12Q9UMY4 172 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 RNF6Q9Y252 685 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 MRPS33Q9Y291 106 aaKnown RBP9.62□□□□□ -0.87
CLRN3-201ENST00000368671 YARS2Q9Y2Z4 477 aaKnown RBP9.62□□□□□ -0.87
CLRN3-201ENST00000368671 TEX264Q9Y6I9 313 aa9.62□□□□□ -0.87
CLRN3-201ENST00000368671 A0A088AWK7 358 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 LRIT2A6NDA9 550 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 ANKDD1BA6NHY2 528 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 G3V3Y1 287 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 ACOT7O00154 380 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 WWP2O00308 870 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 CES2O00748 559 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 OR2J2O76002 312 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 OR6B1O95007 311 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 VSIG8P0DPA2 414 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 ZNF10P21506 573 aaPredicted RBP9.61□□□□□ -0.87
CLRN3-201ENST00000368671 IVDP26440 423 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 CERS1P27544 350 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 CHRNB4P30926 498 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 SLC6A12P48065 614 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 GPR143P51810 404 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 ARL4CP56559 192 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 NUP107P57740 925 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 PPIAP62937 165 aaKnown RBP9.61□□□□□ -0.87
CLRN3-201ENST00000368671 FBXO48Q5FWF7 155 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 ADNP2Q6IQ32 1131 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 TRIM40Q6P9F5 258 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 ADAMTSL2Q86TH1 951 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 ZC3HC1Q86WB0 502 aaKnown RBP9.61□□□□□ -0.87
CLRN3-201ENST00000368671 CCDC71Q8IV32 467 aaPredicted RBP9.61□□□□□ -0.87
CLRN3-201ENST00000368671 ZNF595Q8IYB9 648 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 TMEM132CQ8N3T6 1108 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 SNX31Q8N9S9 440 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 FBXO36Q8NEA4 188 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 OR2L5Q8NG80 312 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 OR2M7Q8NG81 312 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 OR5M3Q8NGP4 307 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 ANKRD7Q92527 254 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 RHBDF1Q96CC6 855 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 LRRC39Q96DD0 335 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 CAPZA3Q96KX2 299 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 QRFPRQ96P65 431 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 UCN2Q96RP3 112 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 SERINC2Q96SA4 455 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 TMEM79Q9BSE2 394 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 TRIM31Q9BZY9 425 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 REXO4Q9GZR2 422 aaKnown RBP9.61□□□□□ -0.87
CLRN3-201ENST00000368671 WWOXQ9NZC7 414 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 PPIEQ9UNP9 301 aaKnown RBP9.61□□□□□ -0.87
CLRN3-201ENST00000368671 CLDN16Q9Y5I7 305 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 CLCA3PQ9Y6N3 262 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 HCFC1P51610 2035 aa9.61□□□□□ -0.87
CLRN3-201ENST00000368671 GTF3C1Q12789 2109 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms