RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 K7EQM0 130 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 M0QYT0 321 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 HS3ST1O14792 307 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 SPRY2O43597 315 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 N4BP1O75113 896 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CIAO1O76071 339 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CALCAP01258 141 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 GBAP04062 536 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CAPN1P07384 714 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 SNRPAP09012 282 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ELFN1P0C7U0 828 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 MLNP12872 115 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ITIH1P19827 911 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 NR1D1P20393 614 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 DRD1P21728 446 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 DRD5P21918 477 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CYP2F1P24903 491 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CD27P26842 260 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 POU1F1P28069 291 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 SERPINA4P29622 427 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 HLA-FP30511 346 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 FRKP42685 505 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 RARRES1P49788 294 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 MFAP4P55083 255 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 NXPH1P58417 271 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 GABPAQ06546 454 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 SLAQ13239 276 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ART3Q13508 389 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CAPRIN1Q14444 709 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 KCNJ12Q14500 433 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 HKDC1Q2TB90 917 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 Q5PR19 223 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 AGBL2Q5U5Z8 902 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ZNF425Q6IV72 752 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CCDC144NLQ6NUI1 221 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 WDR88Q6ZMY6 472 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 DPY19L3Q6ZPD9 716 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 COLCA1Q6ZS62 124 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CYP4V2Q6ZWL3 525 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 FRA10AC1Q70Z53 315 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 BHLHA15Q7RTS1 189 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 TRMT11Q7Z4G4 463 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ZNF410Q86VK4 478 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CNGA4Q8IV77 575 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ZDHHC21Q8IVQ6 265 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 SERPINA12Q8IW75 414 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 FOXRED2Q8IWF2 684 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CHERPQ8IWX8 916 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 OR4N4Q8N0Y3 316 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 GPR137CQ8N3F9 429 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ARFGAP1Q8N6T3 406 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 C12orf76Q8N812 135 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CEP112Q8N8E3 955 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 MINDY2Q8NBR6 621 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 OR8J2Q8NGG1 315 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 OR10T2Q8NGX3 314 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 FANK1Q8TC84 345 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 HMGB4Q8WW32 186 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ATL1Q8WXF7 558 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 TFAP2BQ92481 460 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ZNF707Q96C28 371 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 RSPRY1Q96DX4 576 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 QRFPRQ96P65 431 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ZNF607Q96SK3 696 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 MMS19Q96T76 1030 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 RIT2Q99578 217 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CDCA3Q99618 268 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 BPIFA3Q9BQP9 254 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 NDEL1Q9GZM8 345 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 P2RY12Q9H244 342 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 BLZF1Q9H2G9 400 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 RGCCQ9H4X1 137 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CLMPQ9H6B4 373 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 RPF1Q9H9Y2 349 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 KIF9Q9HAQ2 790 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CHRAC1Q9NRG0 131 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 C11orf21Q9P2W6 132 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ERVK-18Q9QC07 812 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 NKX1-2Q9UD57 310 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 KLK13Q9UKR3 277 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 FZD10Q9ULW2 581 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 VPS4AQ9UN37 437 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 RUVBL2Q9Y230 463 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 IFT52Q9Y366 437 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 SAMHD1Q9Y3Z3 626 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 CACNG2Q9Y698 323 aa4.84□□□□□ -1.63
ECHDC1-204ENST00000368292 ACACAQ13085 2346 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SDK1Q7Z5N4 2213 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 EMSYQ7Z589 1322 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 A0A0J9YYE9 177 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TRPC5OSA6NMA1 111 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 OR52A4PA6NMU1 304 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC38A8A6NNN8 435 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 GABRR3A8MPY1 467 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 HIDE1A8MVS5 230 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 E7ENQ6 273 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 ADAMDEC1O15204 470 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 KMOO15229 486 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 KCNAB3O43448 404 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SUV39H1O43463 412 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms