RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ZNF700Q9H0M5 742 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 FARSBQ9NSD9 589 aaKnown RBP13.77□□□□□ -0.21
SF3B5-201ENST00000367569 RIC8BQ9NVN3 520 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 PTGFRNQ9P2B2 879 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 FBXW2Q9UKT8 454 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 TMCO1Q9UM00 188 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 CENPEQ02224 2701 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 LOC102723996A0A087X1L8 192 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 PLPP1O14494 284 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 COPEO14579 308 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 CDH16O75309 829 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 SPAG7O75391 227 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 GBAP04062 536 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 PROCP04070 461 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 NUDT17P0C025 328 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 PRR35P0CG20 571 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 KRT4P19013 534 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 JAK1P23458 1154 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 ATP5F1P24539 256 aaPredicted RBP13.76□□□□□ -0.21
SF3B5-201ENST00000367569 GSTM2P28161 218 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 MTTPP55157 894 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 LIM2P55344 173 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 RAB38P57729 211 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 OR4D2P58180 307 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 HERVK_113P63132 956 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 BTBD16Q32M84 506 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 ZNF678Q5SXM1 525 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 LIPJQ5W064 366 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 IGFL3Q6UXB1 125 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 SH2D5Q6ZV89 423 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 TDRPQ86YL5 185 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 KBTBD2Q8IY47 623 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 SRRM1Q8IYB3 904 aaKnown RBP13.76□□□□□ -0.21
SF3B5-201ENST00000367569 CCNYL1Q8N7R7 359 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 L3MBTL4Q8NA19 623 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 WDR20Q8TBZ3 569 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 PPP4R1Q8TF05 950 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 CMTM7Q96FZ5 175 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 CNDP1Q96KN2 507 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 KCNC2Q96PR1 638 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 KCNA7Q96RP8 456 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 SERINC2Q96SA4 455 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 ERVK-6Q9BXR3 956 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 LHPPQ9H008 270 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 PRDM7Q9NQW5 492 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 ASF1BQ9NVP2 202 aa13.76□□□□□ -0.21
SF3B5-201ENST00000367569 G3V2L1 256 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 PRMT3O60678 531 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 EEDO75530 441 aaKnown RBP13.75□□□□□ -0.21
SF3B5-201ENST00000367569 MYL2P10916 166 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 ATP5A1P25705 553 aaKnown RBP13.75□□□□□ -0.21
SF3B5-201ENST00000367569 HTR6P50406 440 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 SOX8P57073 446 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 CLCQ05315 142 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 SLC13A2Q13183 592 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 MILR1Q7Z6M3 343 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 IQCKQ8N0W5 287 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 KIF2BQ8N4N8 673 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 CISD2Q8N5K1 135 aaKnown RBP13.75□□□□□ -0.21
SF3B5-201ENST00000367569 CDYL2Q8N8U2 506 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 ACOT4Q8N9L9 421 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 PRR7Q8TB68 274 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 SLC29A3Q9BZD2 475 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 SHCBP1LQ9BZQ2 653 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 PRTFDC1Q9NRG1 225 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 PLA2G3Q9NZ20 509 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 C19orf25Q9UFG5 118 aaPredicted RBP13.75□□□□□ -0.21
SF3B5-201ENST00000367569 ZNF225Q9UK10 706 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 B3GNT3Q9Y2A9 372 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 PCDHGA11Q9Y5H2 935 aa13.75□□□□□ -0.21
SF3B5-201ENST00000367569 A0A088AWK7 358 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 H0YIV9 168 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 MAN1A2O60476 641 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 PLIN3O60664 434 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 LDB3O75112 727 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 CBX6O95503 412 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 ALPPP05187 535 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 GSTA1P08263 222 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 CREB1P16220 341 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 ZNF10P21506 573 aaPredicted RBP13.74□□□□□ -0.21
SF3B5-201ENST00000367569 HIST1H1TP22492 207 aaPredicted RBP13.74□□□□□ -0.21
SF3B5-201ENST00000367569 HNRNPH2P55795 449 aaKnown RBP13.74□□□□□ -0.21
SF3B5-201ENST00000367569 PHEXP78562 749 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 ACTN3Q08043 901 aaPredicted RBP13.74□□□□□ -0.21
SF3B5-201ENST00000367569 PCDH1Q08174 1060 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 TGM3Q08188 693 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 NR6A1Q15406 480 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 AP5B1Q2VPB7 878 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 CRB2Q5IJ48 1285 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 FRG2Q64ET8 278 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 NIPAL1Q6NVV3 410 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 ZYG11AQ6WRX3 759 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 QSOX2Q6ZRP7 698 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 DOK4Q8TEW6 326 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 PSMF1Q92530 271 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 REPS1Q96D71 796 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 SEC16BQ96JE7 1060 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 VPS50Q96JG6 964 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 IMMP1LQ96LU5 166 aa13.74□□□□□ -0.21
SF3B5-201ENST00000367569 FRG2BQ96QU4 278 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms