RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 AP2A2O94973 939 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 HMGA1P17096 107 aaKnown RBP12.99□□□□□ -0.33
PRKN-205ENST00000366897 CRYBB2P43320 205 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 BDKRB1P46663 353 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 CRISP1P54107 249 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 PTSQ03393 145 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 VEPH1Q14D04 833 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 EIF4HQ15056 248 aaKnown RBP12.99□□□□□ -0.33
PRKN-205ENST00000366897 SPHARQ15513 63 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 GCNT6Q5T4J0 391 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 C22orf42Q6IC83 251 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 ERAP2Q6P179 960 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 C19orf48Q6RUI8 117 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 HMGN2P46Q86SG4 172 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 MEX3DQ86XN8 651 aaKnown RBP12.99□□□□□ -0.33
PRKN-205ENST00000366897 CPA6Q8N4T0 437 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 VPS37AQ8NEZ2 397 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 ALG14Q96F25 216 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 RNF170Q96K19 258 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 GIMAP4Q9NUV9 329 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 FTSJ1Q9UET6 329 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 SNX11Q9Y5W9 270 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 OR6C70A6NIJ9 312 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 ARHGEF33A8MVX0 844 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 TPST2O60704 377 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 ARHGEF15O94989 841 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 OR56A5P0C7T3 313 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 CKBP12277 381 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 PSPHP78330 225 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 RUNX1T1Q06455 604 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 E2F2Q14209 437 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 PRSS53Q2L4Q9 553 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 GPR33Q49SQ1 333 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 SYCE2Q6PIF2 218 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 NOXA1Q86UR1 476 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 FLCNQ8NFG4 579 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 DIRAS2Q96HU8 199 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 CWH43Q9H720 699 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 BRD9Q9H8M2 597 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 TRPM5Q9NZQ8 1165 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 CARD8Q9Y2G2 431 aa12.99□□□□□ -0.33
PRKN-205ENST00000366897 A0A1W2PQL4 384 aaPredicted RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 CCDC182A6NF36 153 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 TNFRSF21O75509 655 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 ITGA2P17301 1181 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 CBLP22681 906 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 CHI3L1P36222 383 aaPredicted RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 RORCP51449 518 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 CDK6Q00534 326 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 TRIM71Q2Q1W2 868 aaKnown RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 GPAT3Q53EU6 434 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 RBM45Q8IUH3 476 aaKnown RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 PLD4Q96BZ4 506 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 SLC6A18Q96N87 628 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 PIP5K1AQ99755 562 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 MIXL1Q9H2W2 232 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 ASAH2Q9NR71 780 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 SPATA6Q9NWH7 488 aaPredicted RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 PCDHGB2Q9Y5G2 931 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 A0A075B6Q4 140 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 A0A0G2JMP0 313 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 A0A0X1KG70 313 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 HMX3A6NHT5 357 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 ZAR1LA6NP61 321 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 FFAR1O14842 300 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 AKR7A2O43488 359 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 UGT2B17O75795 530 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 C8GP07360 202 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 CSF3P09919 207 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 IFI30P13284 250 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 ZNF8P17098 575 aaPredicted RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 MYL9P24844 172 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 OPRD1P41143 372 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 XCR1P46094 333 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 PXNP49023 591 aaPredicted RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 LSM11P83369 360 aaKnown RBP eCLIP12.98□□□□□ -0.33
PRKN-205ENST00000366897 SEC23BQ15437 767 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 MPEG1Q2M385 716 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 MPPE1Q53F39 396 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 METTL2BQ6P1Q9 378 aaKnown RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 TMPRSS11BQ86T26 416 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 TCEANCQ8N8B7 351 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 ARL14EPQ8N8R7 260 aaPredicted RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 OR7G3Q8NG95 312 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 WFDC6Q9BQY6 131 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 TTLL2Q9BWV7 592 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 SORBS1Q9BX66 1292 aaKnown RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 KLF16Q9BXK1 252 aaPredicted RBP12.98□□□□□ -0.33
PRKN-205ENST00000366897 OR51B5Q9H339 312 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 TOR4AQ9NXH8 423 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 NPAP1Q9NZP6 1156 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 GRIP1Q9Y3R0 1128 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 CLCA3PQ9Y6N3 262 aa12.98□□□□□ -0.33
PRKN-205ENST00000366897 CENPBD1B2RD01 187 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 B4DXG7 233 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 TLR4O00206 839 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 MEN1O00255 615 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 ZNF821O75541 412 aaPredicted RBP12.97□□□□□ -0.33
PRKN-205ENST00000366897 ALX3O95076 343 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms