RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 ABI3Q9P2A4 366 aa13.74□□□□□ -0.21
MRPL55-218ENST00000366747 TRPS1Q9UHF7 1281 aa13.74□□□□□ -0.21
MRPL55-218ENST00000366747 PHF11Q9UIL8 331 aa13.74□□□□□ -0.21
MRPL55-218ENST00000366747 GRID1Q9ULK0 1009 aa13.74□□□□□ -0.21
MRPL55-218ENST00000366747 SNX6Q9UNH7 406 aa13.74□□□□□ -0.21
MRPL55-218ENST00000366747 RNF11Q9Y3C5 154 aa13.74□□□□□ -0.21
MRPL55-218ENST00000366747 CCDC88CQ9P219 2028 aa13.74□□□□□ -0.21
MRPL55-218ENST00000366747 FASNP49327 2511 aaKnown RBP13.73□□□□□ -0.21
MRPL55-218ENST00000366747 A0A0G2JN53 185 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 SAGE2PA6NJ88 616 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 GOLGA8RI6L899 631 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 CYR61O00622 381 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 CTNSO60931 367 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 DNAJB6O75190 326 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 ITGAMP11215 1152 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 IMPDH1P20839 514 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 PPP2R1BP30154 601 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 SLC26A5P58743 744 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 RPS13P62277 151 aaKnown RBP13.73□□□□□ -0.21
MRPL55-218ENST00000366747 CLCQ05315 142 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 ZNF33BQ06732 778 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 SLC13A2Q13183 592 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 INAQ16352 499 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 ZNF678Q5SXM1 525 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 TTC19Q6DKK2 380 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-218ENST00000366747 OR4C11Q6IEV9 310 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 ZNF793Q6ZN11 406 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 SH2D5Q6ZV89 423 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 HOMEZQ8IX15 550 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 MREGQ8N565 214 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 SLC5A8Q8N695 610 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 Q8NA96 180 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 HAS2Q92819 552 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 MIB2Q96AX9 1013 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 ZNF354BQ96LW1 612 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 ZNF382Q96SR6 550 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 MTERF1Q99551 399 aaKnown RBP13.73□□□□□ -0.21
MRPL55-218ENST00000366747 OR51B5Q9H339 312 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 ELOVL6Q9H5J4 265 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 BRF2Q9HAW0 419 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 SEMA4BQ9NPR2 832 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-218ENST00000366747 NMRK1Q9NWW6 199 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 LYARQ9NX58 379 aaKnown RBP13.73□□□□□ -0.21
MRPL55-218ENST00000366747 MKS1Q9NXB0 559 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 AHSPQ9NZD4 102 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 KCMF1Q9P0J7 381 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 PTGFRNQ9P2B2 879 aa13.73□□□□□ -0.21
MRPL55-218ENST00000366747 PPIEQ9UNP9 301 aaKnown RBP13.73□□□□□ -0.21
MRPL55-218ENST00000366747 IGHV3-20A0A0C4DH32 117 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 CCDC151A5D8V7 595 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 FAM227AF5H4B4 570 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 PLPP1O14494 284 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 DLX3O60479 287 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 SUPT7LO94864 414 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 HSD3B1P14060 373 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 MAOAP21397 527 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 HSD3B2P26439 372 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 TLX1P31314 330 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-218ENST00000366747 SLCO1A2P46721 670 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 ARG2P78540 354 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 BTG2P78543 158 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 SLC18A2Q05940 514 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 IFFO1Q0D2I5 559 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 MEP1AQ16819 746 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 RPUSD3Q6P087 351 aaKnown RBP13.72□□□□□ -0.21
MRPL55-218ENST00000366747 PAGE2Q7Z2X7 111 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 NUDT13Q86X67 352 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 OR4F6Q8NGB9 312 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 DNAJB14Q8TBM8 379 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 CPT1CQ8TCG5 803 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 EPS8L3Q8TE67 593 aaKnown RBP13.72□□□□□ -0.21
MRPL55-218ENST00000366747 NSUN5Q96P11 429 aaKnown RBP13.72□□□□□ -0.21
MRPL55-218ENST00000366747 SLC29A3Q9BZD2 475 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 DDX31Q9H8H2 851 aaKnown RBP13.72□□□□□ -0.21
MRPL55-218ENST00000366747 KCNK13Q9HB14 408 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 ADAP2Q9NPF8 381 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 RYDENQ9NUL5 291 aaKnown RBP13.72□□□□□ -0.21
MRPL55-218ENST00000366747 LGALS13Q9UHV8 139 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 ADAM29Q9UKF5 820 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 PCDHGA10Q9Y5H3 936 aa13.72□□□□□ -0.21
MRPL55-218ENST00000366747 TRAV17A0A0B4J275 112 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 A0A1W2PPM1 405 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 OR2W5A6NFC9 320 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 COPEO14579 308 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 KRT6AP02538 564 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 KRT6BP04259 564 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 ENO1P06733 434 aaKnown RBP13.71□□□□□ -0.21
MRPL55-218ENST00000366747 MYL2P10916 166 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 CPN2P22792 545 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 BUD31P41223 144 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-218ENST00000366747 KRT6CP48668 564 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 PKNOX1P55347 436 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 KCNC4Q03721 635 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 LCP2Q13094 533 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 ZNF169Q14929 603 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-218ENST00000366747 ELAVL1Q15717 326 aaKnown RBP13.71□□□□□ -0.21
MRPL55-218ENST00000366747 PLEKHN1Q494U1 663 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-218ENST00000366747 ZYG11AQ6WRX3 759 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 LINC00696Q6ZRV3 163 aa13.71□□□□□ -0.21
MRPL55-218ENST00000366747 SHISA5Q8N114 240 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms