RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.57□□□□□ -0.4
SQSTM1-201ENST00000360718 MICU2Q8IYU8 434 aa12.57□□□□□ -0.4
SQSTM1-201ENST00000360718 LIX1Q8N485 282 aa12.57□□□□□ -0.4
SQSTM1-201ENST00000360718 FAM46DQ8NEK8 389 aa12.57□□□□□ -0.4
SQSTM1-201ENST00000360718 OR5K1Q8NHB7 308 aa12.57□□□□□ -0.4
SQSTM1-201ENST00000360718 GIPC3Q8TF64 312 aa12.57□□□□□ -0.4
SQSTM1-201ENST00000360718 VPS29Q9UBQ0 182 aa12.57□□□□□ -0.4
SQSTM1-201ENST00000360718 PSME2Q9UL46 239 aa12.57□□□□□ -0.4
SQSTM1-201ENST00000360718 DOLKQ9UPQ8 538 aa12.57□□□□□ -0.4
SQSTM1-201ENST00000360718 CACNA1EQ15878 2313 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 BCAT2O15382 392 aaPredicted RBP12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 POLR2IP36954 125 aaKnown RBP12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 MAGEA8P43361 318 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 AFF3P51826 1226 aaKnown RBP12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 RAD23AP54725 363 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 NXPH1P58417 271 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 MEF2AQ02078 507 aaPredicted RBP12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 PRDX1Q06830 199 aaKnown RBP12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 IL18R1Q13478 541 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 ENPP6Q6UWR7 440 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 R3HCC1LQ7Z5L2 792 aaKnown RBP12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 TRIM73Q86UV7 250 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 GKN2Q86XP6 184 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 FAM20CQ8IXL6 584 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 LAS2Q8IYD9 372 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 NAGSQ8N159 534 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 OR4E2Q8NGC2 313 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 HUS1BQ8NHY5 278 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 SLC22A18Q96BI1 424 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 METTL2AQ96IZ6 378 aaKnown RBP12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 OR52E6Q96RD3 313 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 PITHD1Q9GZP4 211 aaPredicted RBP12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 CLMPQ9H6B4 373 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 RMND5AQ9H871 391 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 TMEM74BQ9NUR3 256 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 POT1Q9NUX5 634 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 CPNE7Q9UBL6 633 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 SPASTQ9UBP0 616 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 NEUROG3Q9Y4Z2 214 aa12.56□□□□□ -0.4
SQSTM1-201ENST00000360718 SPEGQ15772 3267 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 FAM220BPB1ANY3 271 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 NPIPB8E9PQR5 432 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 MYO1DO94832 1006 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 PEBP1P30086 187 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 HNRNPKP61978 463 aaKnown RBP eCLIP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 ABATP80404 500 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 PPP2R2BQ00005 443 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 PTGR1Q14914 329 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 TEAD4Q15561 434 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 SF1Q15637 639 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 C16orf87Q6PH81 154 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 HIPK1Q86Z02 1210 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 SPARTQ8N0X7 666 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 ZNF740Q8NDX6 193 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 ABHD11Q8NFV4 315 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 NCLNQ969V3 563 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 FAM120BQ96EK7 910 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 PLEKHA8Q96JA3 519 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 COX4I2Q96KJ9 171 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 NAA50Q9GZZ1 169 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 MRPS30Q9NP92 439 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 DCAF13Q9NV06 445 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 CUEDC1Q9NWM3 386 aaPredicted RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 SPHK1Q9NYA1 384 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 CABIN1Q9Y6J0 2220 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 ANKDD1BA6NHY2 528 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 MAGEB17A8MXT2 336 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 ISM1B1AKI9 464 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 H7BY64 318 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 FOXE1O00358 373 aaPredicted RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 HRO43593 1189 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 E2F6O75461 281 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 CREG1O75629 220 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 PRKD3O94806 890 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 INHBBP09529 407 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 PRPS2P11908 318 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 CMPK1P30085 196 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 GRK3P35626 688 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 PIK3CBP42338 1070 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 BNIP3Q12983 259 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 SPANXN4Q5MJ08 99 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 ADCK2Q7Z695 626 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 SLC9B2Q86UD5 537 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 FAM129CQ86XR2 697 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 TMEM132CQ8N3T6 1108 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 ZCCHC7Q8N3Z6 543 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 TBC1D19Q8N5T2 526 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 AVL9Q8NBF6 648 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 OR2A1Q8NGT9 310 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 ZDHHC1Q8WTX9 485 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 TRUB1Q8WWH5 349 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 PRAP1Q96NZ9 151 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 LHPPQ9H008 270 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 KCNH6Q9H252 994 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 SMURF2Q9HAU4 748 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 TSC22D4Q9Y3Q8 395 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 PCDHGA8Q9Y5G5 932 aa12.55□□□□□ -0.4
SQSTM1-201ENST00000360718 B4GAT1O43505 415 aa12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 PRICKLE3O43900 615 aaPredicted RBP12.54□□□□□ -0.4
SQSTM1-201ENST00000360718 CHRM5P08912 532 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms