RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CRISP1P54107 249 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 TBPL1P62380 186 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 HYAL2Q12891 473 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 SWI5Q1ZZU3 235 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 PGM2L1Q6PCE3 622 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 SLC36A4Q6YBV0 504 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 OR52E4Q8NGH9 312 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 DPAGT1Q9H3H5 408 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 ENAMQ9NRM1 1142 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 HCN2Q9UL51 889 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 NDRG2Q9UN36 371 aaKnown RBP13.19□□□□□ -0.3
VCP-201ENST00000358901 MAGED1Q9Y5V3 778 aaPredicted RBP13.19□□□□□ -0.3
VCP-201ENST00000358901 COL2A1P02458 1487 aaPredicted RBP13.19□□□□□ -0.3
VCP-201ENST00000358901 NUP98P52948 1817 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 H3BMQ9 156 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 KMOO15229 486 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 TRIM3O75382 744 aaPredicted RBP13.19□□□□□ -0.3
VCP-201ENST00000358901 HSD3B1P14060 373 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 HSD3B2P26439 372 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 C4orf46Q504U0 113 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 MEDAGQ5VYS4 303 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 CNKSR3Q6P9H4 555 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 NCEH1Q6PIU2 408 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 NCCRP1Q6ZVX7 275 aaPredicted RBP13.19□□□□□ -0.3
VCP-201ENST00000358901 ZNF367Q7RTV3 350 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 TMCO2Q7Z6W1 182 aaPredicted RBP13.19□□□□□ -0.3
VCP-201ENST00000358901 BPIFB1Q8TDL5 484 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 OR5P2Q8WZ92 322 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 APIPQ96GX9 242 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 COG8Q96MW5 612 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 F2RL3Q96RI0 385 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 TRIB3Q96RU7 358 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 TM9SF2Q99805 663 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 LGR4Q9BXB1 951 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
VCP-201ENST00000358901 TPD52L2O43399 206 aaKnown RBP13.18□□□□□ -0.3
VCP-201ENST00000358901 UBXN7O94888 489 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 RAB36O95755 333 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 TFAP2AP05549 437 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 CSN2P05814 226 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 ZNF865P0CJ78 1059 aaPredicted RBP13.18□□□□□ -0.3
VCP-201ENST00000358901 CD9P21926 228 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 CPOXP36551 454 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 ZXDBP98169 803 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 ENPP2Q13822 863 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 RCAN2Q14206 197 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 GFOD2Q3B7J2 385 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 ZNF805Q5CZA5 627 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 PIWIL3Q7Z3Z3 882 aaKnown RBP13.18□□□□□ -0.3
VCP-201ENST00000358901 CELF5Q8N6W0 485 aaKnown RBP13.18□□□□□ -0.3
VCP-201ENST00000358901 CEP76Q8TAP6 659 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 FATE1Q969F0 183 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 RNF38Q9H0F5 515 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 MAGIXQ9H6Y5 334 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 IL26Q9NPH9 171 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 GPR83Q9NYM4 423 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 INSL6Q9Y581 213 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 A0A0X1KG70 313 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 MBLAC1A4D2B0 266 aaPredicted RBP13.18□□□□□ -0.3
VCP-201ENST00000358901 A8MUA0 341 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 INMT-MINDY4F8WBC2 141 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 BCAS1O75363 584 aaPredicted RBP13.18□□□□□ -0.3
VCP-201ENST00000358901 RENP00797 406 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 LCKP06239 509 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 TACSTD2P09758 323 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 MPC1LP0DKB6 136 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 GRIA2P42262 883 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 MASP1P48740 699 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 TCEAL5Q5H9L2 206 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 IER5LQ5T953 404 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 EGFL6Q8IUX8 553 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 PROKR2Q8NFJ6 384 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 NEIL3Q8TAT5 605 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 OSTF1Q92882 214 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 INPP5KQ9BT40 448 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 TREX1Q9NSU2 369 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 ERVK13-1Q9NX77 482 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 UPB1Q9UBR1 384 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 OR14I1A6ND48 311 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 TMEM150CB9EJG8 249 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 VILLO15195 856 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 SLC16A5O15375 505 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 F8A1P23610 371 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 GDI1P31150 447 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 SLC5A8Q8N695 610 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 RETREG1Q9H6L5 497 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 POLE3Q9NRF9 147 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 CENPMQ9NSP4 180 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 PCDHGB5Q9Y5G0 923 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 RHPN2P1A8MT19 583 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 I3L521 148 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 PLOD2O00469 737 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 AGXTP21549 392 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 MAP3K8P41279 467 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 CES4AQ5XG92 561 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 C22orf42Q6IC83 251 aa13.18□□□□□ -0.3
VCP-201ENST00000358901 ABHD13Q7L211 337 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms