RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CDC42P60953 191 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 DSTNP60981 165 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 RPS26P62854 115 aaKnown RBP8.21□□□□□ -1.1
RFX3-202ENST00000358730 BCL7AQ4VC05 210 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 ARMCX4Q5H9R4 360 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 PRAMEF14Q5SWL7 426 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 PRAMEF13Q5VWM6 474 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 KIAA0907Q7Z7F0 614 aaPredicted RBP8.21□□□□□ -1.1
RFX3-202ENST00000358730 NLGN4XQ8N0W4 816 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 C2orf73Q8N5S3 287 aaPredicted RBP8.21□□□□□ -1.1
RFX3-202ENST00000358730 B3GNT7Q8NFL0 401 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 LRIG1Q96JA1 1093 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 IL17FQ96PD4 163 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 SLC6A16Q9GZN6 736 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 ENPP4Q9Y6X5 453 aa8.21□□□□□ -1.1
RFX3-202ENST00000358730 TCF20Q9UGU0 1960 aaKnown RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 A8MVJ9 347 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 FAM227AF5H4B4 570 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 PSMD11O00231 422 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 DSCR3O14972 297 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 AQP9O43315 295 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 LILRB5O75023 590 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 KLHL18O94889 574 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 IRS1P35568 1242 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 GPR1P46091 355 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 RGS6P49758 472 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 SEPHS1P49903 392 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 DGKEP52429 567 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 CRISP3P54108 245 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 PRMT2P55345 433 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 OLR1P78380 273 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 TEKQ02763 1124 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 PTGES3Q15185 160 aaKnown RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 RPS26P11Q5JNZ5 115 aaPredicted RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 TPRG1LQ5T0D9 272 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 PLPP4Q5VZY2 271 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 HTRA1Q92743 480 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 HPS1Q92902 700 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 NUS1Q96E22 293 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 MTERF3Q96E29 417 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 COQ10AQ96MF6 247 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 CENPOQ9BU64 300 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 ACAT2Q9BWD1 397 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 EPHX3Q9H6B9 360 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 SCHIP1Q9P0W5 487 aaPredicted RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 TAAR2Q9P1P5 351 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 ENOPH1Q9UHY7 261 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 PLAGL1Q9UM63 463 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 CFAP20Q9Y6A4 193 aaKnown RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 NOTCH4Q99466 2003 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 TMEM221A6NGB7 291 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 SAGE2PA6NJ88 616 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 HIDE1A8MVS5 230 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 ACRP10323 421 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 RHCEP18577 417 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 CBLP22681 906 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 POU1F1P28069 291 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 S100A5P33763 92 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 PIK3CBP42338 1070 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 LIMS1P48059 325 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 TMED10P49755 219 aaKnown RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 ST8SIA6P61647 398 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 NTHL1P78549 312 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 NFE2L1Q14494 772 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 EIF4HQ15056 248 aaKnown RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 MED22Q15528 200 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 TNFAIP8L2Q6P589 184 aaPredicted RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 KLHL17Q6TDP4 642 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 TMIGD1Q6UXZ0 262 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 CEACAM20Q6UY09 585 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 IKBIPQ70UQ0 350 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 LYSMD2Q8IV50 215 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 SLC44A2Q8IWA5 706 aaPredicted RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 LRRC56Q8IYG6 542 aaPredicted RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 UBE2E3Q969T4 207 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 Q96MT0 163 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 RAD9AQ99638 391 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 NLNQ9BYT8 704 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 CXorf36Q9H7Y0 433 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 NMNAT1Q9HAN9 279 aaPredicted RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 SACM1LQ9NTJ5 587 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 CCDC59Q9P031 241 aaKnown RBP8.2□□□□□ -1.1
RFX3-202ENST00000358730 IFT52Q9Y366 437 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 PTPRSQ13332 1948 aa8.2□□□□□ -1.1
RFX3-202ENST00000358730 C5orf58C9J3I9 102 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 TAF4O00268 1085 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 SPINT1O43278 529 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 BCHEP06276 602 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 CCL5P13501 91 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 CHMP24386 653 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 DGKGP49619 791 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 EPHA5P54756 1037 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 DUSP7Q16829 419 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 TCEAL5Q5H9L2 206 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 STEAP3Q658P3 488 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 TUBA3EQ6PEY2 450 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 NCCRP1Q6ZVX7 275 aaPredicted RBP8.19□□□□□ -1.1
RFX3-202ENST00000358730 PTCHD4Q6ZW05 846 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 ZNF367Q7RTV3 350 aa8.19□□□□□ -1.1
RFX3-202ENST00000358730 VN1R5Q7Z5H4 357 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms