RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C16orf78Q8WTQ4 265 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 SLC44A1Q8WWI5 657 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 LRIG1Q96JA1 1093 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 PFDN5Q99471 154 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 FUZQ9BT04 418 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 RAB11FIP5Q9BXF6 653 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 C12orf65Q9H3J6 166 aaKnown RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 PAK6Q9NQU5 681 aaPredicted RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 COPZ2Q9P299 210 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 TNFRSF10DQ9UBN6 386 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 PISDQ9UG56 409 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 RAB21Q9UL25 225 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 TSTD3H0UI37 97 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 CCNE2O96020 404 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 CST3P01034 146 aaPredicted RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 GSTT1P30711 240 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 CTC1Q2NKJ3 1217 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 PARP15Q460N3 678 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 GDPD4Q6W3E5 623 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 RABEPKQ7Z6M1 372 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 CPSF7Q8N684 471 aaKnown RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 BPIFCQ8NFQ6 507 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 MSI2Q96DH6 328 aaKnown RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 TMEM59Q9BXS4 323 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 CLK4Q9HAZ1 481 aaKnown RBP9.43□□□□□ -0.9
CHD3-202ENST00000358181 PLSCR3Q9NRY6 295 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 P2RX2Q9UBL9 471 aa9.43□□□□□ -0.9
CHD3-202ENST00000358181 A0A1W2PPM1 405 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 KCNU1A8MYU2 1149 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 UGT1A4P22310 534 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ILF2Q12905 390 aaKnown RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 MOGSQ13724 837 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 FLYWCH1Q4VC44 716 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 IFI44LQ53G44 452 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 PRAMEF14Q5SWL7 426 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 PRAMEF13Q5VWM6 474 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 METTL4Q8N3J2 472 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 RNF175Q8N4F7 328 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ARL14Q8N4G2 192 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 TMEM104Q8NE00 496 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 RAD9AQ99638 391 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 RHCGQ9UBD6 479 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 RPL36Q9Y3U8 105 aaKnown RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 ST14Q9Y5Y6 855 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 VWDEQ8N2E2 1590 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 MTMR11A4FU01 709 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 OR6C70A6NIJ9 312 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 APOC4-APOC2K7ER74 178 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 APOC2P02655 101 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 HOXB8P17481 243 aaPredicted RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 ALDH3B1P43353 468 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 GRB2P62993 217 aaKnown RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 TUBA1BP68363 451 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 KLF10Q13118 480 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 RPA4Q13156 261 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 NFE2L1Q14494 772 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 KLHL22Q53GT1 634 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 TUBA1AQ71U36 451 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 HM13Q8TCT9 377 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 LENG8Q96PV6 779 aaPredicted RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 VRK1Q99986 396 aaPredicted RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 SYT17Q9BSW7 474 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 NKX2-4Q9H2Z4 354 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 WDR55Q9H6Y2 383 aaPredicted RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 DCAF16Q9NXF7 216 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ZNF891A8MT65 544 aaPredicted RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 VEGFDO43915 354 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ALDOBP05062 364 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 GABRR1P24046 479 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 GAS6Q14393 721 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ITPRIPL2Q3MIP1 535 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 RBM20Q5T481 1227 aaKnown RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 ZNF648Q5T619 568 aaPredicted RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 SUSD1Q6UWL2 747 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 SLC24A5Q71RS6 500 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 WDR53Q7Z5U6 358 aaPredicted RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 PYROXD2Q8N2H3 581 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 KLRG1Q96E93 195 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 OR14A2Q96R54 314 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 RABL2AQ9UBK7 228 aaPredicted RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 DHDHQ9UQ10 334 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ARVCFO00192 962 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 NUDT21O43809 227 aaKnown RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 SOX14O95416 240 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 SPATA31C1P0DKV0 1188 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 PRPH2P23942 346 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 MTPNP58546 118 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ZNF367Q7RTV3 350 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ADGRD2Q7Z7M1 963 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 LRRTM4Q86VH4 590 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 SFXN2Q96NB2 322 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 CIB1Q99828 191 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 FAM173AQ9BQD7 235 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ZCCHC3Q9NUD5 404 aaKnown RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 GPATCH2Q9NW75 528 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 SIGLEC16A6NMB1 481 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 SPATA31C2B4DYI2 1134 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 SOCS2O14508 198 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms