RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CFAP20Q9Y6A4 193 aaKnown RBP14.3□□□□□ -0.12
CHD4-201ENST00000357008 FOXD2O60548 495 aaPredicted RBP14.3□□□□□ -0.12
CHD4-201ENST00000357008 C8orf89P0DMQ9 161 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 CRISP1P54107 249 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 IRF5Q13568 498 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 LRRN1Q6UXK5 716 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 MMAAQ8IVH4 418 aaKnown RBP14.3□□□□□ -0.12
CHD4-201ENST00000357008 KRTCAP2Q8N6L1 136 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 CASTOR1Q8WTX7 329 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 VRTNQ9H8Y1 702 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 FAIMQ9NVQ4 179 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 PET100P0DJ07 73 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 BMP2P12643 396 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 CDKN1CP49918 316 aaPredicted RBP14.3□□□□□ -0.12
CHD4-201ENST00000357008 OR4D2P58180 307 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 EIF2S3LQ2VIR3 472 aaKnown RBP14.3□□□□□ -0.12
CHD4-201ENST00000357008 C22orf39Q6P5X5 142 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 KBTBD6Q86V97 674 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 C7orf57Q8NEG2 295 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 LRRC15Q8TF66 581 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 NSMAFQ92636 917 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 RANBP9Q96S59 729 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 DPYSL5Q9BPU6 564 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 BCL7BQ9BQE9 202 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 SLC39A1Q9NY26 324 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 ZNF821O75541 412 aaPredicted RBP14.3□□□□□ -0.12
CHD4-201ENST00000357008 HSD3B1P14060 373 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 HSD3B2P26439 372 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 PDGFRLQ15198 375 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 CDKL4Q5MAI5 379 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 NRSN1Q8IZ57 195 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 DENND6BQ8NEG7 585 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 OR2T33Q8NG76 320 aa14.3□□□□□ -0.12
CHD4-201ENST00000357008 SMAD9O15198 467 aaKnown RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 STSP08842 583 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 ZNF280AP59817 542 aaPredicted RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 ACTC1P68032 377 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 ACTA1P68133 377 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 NIPAL4Q0D2K0 466 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 GLT8D1Q68CQ7 371 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 TXNDC8Q6A555 127 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 SLC29A4Q7RTT9 530 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 UBQLNLQ8IYU4 475 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 LNX2Q8N448 690 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 PRR11Q96HE9 360 aaPredicted RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 ABI3Q9P2A4 366 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 OAZ2O95190 189 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 S1PR4O95977 384 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 HCKP08631 526 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 GLP1RP43220 463 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 CTBP2P56545 445 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 MLLT1Q03111 559 aaPredicted RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 ATXN7L3Q14CW9 347 aaPredicted RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 FAM86B1Q8N7N1 296 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 KCNN1Q92952 543 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 MYRFLQ96LU7 910 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 GSKIPQ9P0R6 139 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 STUB1Q9UNE7 303 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 A0A1B0GVI7 797 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 SLC16A5O15375 505 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 PDYNP01213 254 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 GKN3PP0CG01 181 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 NFATC2Q13469 925 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 PLA2G15Q8NCC3 412 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 MAELQ96JY0 434 aaKnown RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 MRGPRX2Q96LB1 330 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 TP63Q9H3D4 680 aaPredicted RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 FOLH1BQ9HBA9 442 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 DUOX1Q9NRD9 1551 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 ODF4Q2M2E3 257 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 ALG10Q5BKT4 473 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 SPIN3Q5JUX0 258 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 CEP68Q76N32 757 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 ZNF565Q8N9K5 539 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 CYB5D2Q8WUJ1 264 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 ASB12Q8WXK4 309 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 TMEM175Q9BSA9 504 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 POLMQ9NP87 494 aaPredicted RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 CRTAC1Q9NQ79 661 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 PTTG1O95997 202 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 PPIGQ13427 754 aaKnown RBP eCLIP14.29□□□□□ -0.126e-7■■□□□ 11.9
CHD4-201ENST00000357008 SLC36A3Q495N2 470 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 C22orf42Q6IC83 251 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 TMEM41AQ96HV5 264 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 SECISBP2Q96T21 854 aaKnown RBP14.29□□□□□ -0.12
CHD4-201ENST00000357008 ABCG5Q9H222 651 aa14.29□□□□□ -0.12
CHD4-201ENST00000357008 PIRO00625 290 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 FCER2P06734 321 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 AIMP2Q13155 320 aaKnown RBP14.28□□□□□ -0.12
CHD4-201ENST00000357008 GTF2IRD2BQ6EKJ0 949 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 RPL13AP3Q6NVV1 102 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 GTF2IRD2Q86UP8 949 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 MFSD2AQ8NA29 543 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 XYLT2Q9H1B5 865 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 ACTL8Q9H568 366 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 RNF121Q9H920 327 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 EDDM13A0A1B0GTR0 161 aa14.28□□□□□ -0.12
CHD4-201ENST00000357008 A0A1W2PQ45 241 aaPredicted RBP14.28□□□□□ -0.12
CHD4-201ENST00000357008 A0A1W2PQY0 241 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms