RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MED26O95402 600 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 CPNE6O95741 557 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 CD59P13987 128 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 ALOX12P18054 663 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 GSTM5P46439 218 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 DUSP3P51452 185 aaPredicted RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 CAPRIN1Q14444 709 aaKnown RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 SLC9A5Q14940 896 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 MPEG1Q2M385 716 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 ABHD13Q7L211 337 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 ANKRD46Q86W74 232 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 PDSS2Q86YH6 399 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 KIAA2013Q8IYS2 634 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 D2HGDHQ8N465 521 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 PRPF18Q99633 342 aaKnown RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 DUSP26Q9BV47 211 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 SUCOQ9UBS9 1254 aaKnown RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 ATG4BQ9Y4P1 393 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 A0A1W2PR48 441 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 LDOC1O95751 146 aaPredicted RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 DDCP20711 480 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 RPL3P39023 403 aaKnown RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 R3HCC1LQ7Z5L2 792 aaKnown RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 TICAM1Q8IUC6 712 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 TMEM125Q96AQ2 219 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 MIEF2Q96C03 454 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 MTERF3Q96E29 417 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 ITCHQ96J02 903 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 CGREF1Q99674 301 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 MAPKAP1Q9BPZ7 522 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 INPP5KQ9BT40 448 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 NLNQ9BYT8 704 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 ZNF768Q9H5H4 540 aaKnown RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 COPS7BQ9H9Q2 264 aaPredicted RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 SLC6A13Q9NSD5 602 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 FAM120CQ9NX05 1096 aaKnown RBP17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 CMTM6Q9NX76 183 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 SH3BP4Q9P0V3 963 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 PACSIN3Q9UKS6 424 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 ERVK-11Q9UQG0 969 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 SLC22A7Q9Y694 548 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 SCN2AQ99250 2005 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 H3BMH7 237 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 NME4O00746 187 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 MAP3K7O43318 606 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 ERN1O75460 977 aaKnown RBP17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 PRKRAO75569 313 aaKnown RBP17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 CKMT2P17540 419 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 IL1RNP18510 177 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 NELFEP18615 380 aaKnown RBP17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 EFNA1P20827 205 aaPredicted RBP17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 RUNX2Q13950 521 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 GPR19Q15760 415 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 INAVAQ3KP66 663 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 LRIF1Q5T3J3 769 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 NDUFAF5Q5TEU4 345 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 NANOGP8Q6NSW7 305 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 KMT5CQ86Y97 462 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 MSRB3Q8IXL7 192 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 SHISA5Q8N114 240 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 DTWD1Q8N5C7 304 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 OR4D9Q8NGE8 314 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 OR8J3Q8NGG0 315 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 DNAJB14Q8TBM8 379 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 RHBDD1Q8TEB9 315 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 JADE3Q92613 823 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 PPCDCQ96CD2 204 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 ASB9Q96DX5 294 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 C10orf90Q96M02 699 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 SERINC2Q96SA4 455 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 PRRX2Q99811 253 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 EDEM2Q9BV94 578 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 TRIM8Q9BZR9 551 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 SPRTNQ9H040 489 aaPredicted RBP17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 NANOGQ9H9S0 305 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 PARD6AQ9NPB6 346 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 SEMA4GQ9NTN9 838 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 FAM86C1Q9NVL1 165 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 KCMF1Q9P0J7 381 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 FBXW2Q9UKT8 454 aa17.19■□□□□ 0.34
SMARCD3-202ENST00000356800 A0A096LPI6 279 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 IGHV5-10-1A0A0J9YXX1 117 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 ZNF860A6NHJ4 632 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 TXNDC9O14530 226 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 ACOT8O14734 319 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 TOX3O15405 576 aaPredicted RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 GALR3O60755 368 aaPredicted RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 TBX19O60806 448 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 LMNAP02545 664 aaKnown RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 HSD17B1P14061 328 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 FOLR1P15328 257 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 HOXB9P17482 250 aaPredicted RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 PTPN6P29350 595 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 CDKN2CP42773 168 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 ARL4DP49703 201 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 TRIM25Q14258 630 aaKnown RBP17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 HEPACAMQ14CZ8 416 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 C6orf10Q5SRN2 563 aa17.18■□□□□ 0.34
SMARCD3-202ENST00000356800 ARHGAP22Q7Z5H3 698 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms