RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PCDH1Q08174 1060 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 NAA30Q147X3 362 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 INAQ16352 499 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 PFKFB4Q16877 469 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 NIPAL1Q6NVV3 410 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 TRIM40Q6P9F5 258 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 RPS27LQ71UM5 84 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 GALNTL5Q7Z4T8 443 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 FJX1Q86VR8 437 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 ARMC10Q8N2F6 343 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 SLC44A1Q8WWI5 657 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 IFT81Q8WYA0 676 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 UCN3Q969E3 161 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 NCLNQ969V3 563 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 FRMD6Q96NE9 622 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 SERINC2Q96SA4 455 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 UTP23Q9BRU9 249 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 CAPS2Q9BXY5 557 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 ZNF717Q9BY31 904 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 PITHD1Q9GZP4 211 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 OPTCQ9UBM4 332 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 TEKT2Q9UIF3 430 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 MMACHCQ9Y4U1 282 aa15.61■□□□□ 0.09
PDLIM7-201ENST00000355572 A0A087X1B8 175 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 TRBV11-1A0A0K0K1C0 115 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 ASPDHA6ND91 283 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 ZNF354AO60765 605 aaPredicted RBP15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 KLHL2O95198 593 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 DDAH2O95865 285 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 SBK3P0C264 359 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 GSTM2P28161 218 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 GCAP28676 217 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 GRHL2Q6ISB3 625 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 GFRALQ6UXV0 394 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 DGAT2L6Q6ZPD8 337 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 GOLGA7Q7Z5G4 137 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 CHERPQ8IWX8 916 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 SLC5A8Q8N695 610 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 ACOT4Q8N9L9 421 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 B3GNT7Q8NFL0 401 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 RHEBL1Q8TAI7 183 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 DOK4Q8TEW6 326 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 DCAKDQ8WVC6 231 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 ISL2Q96A47 359 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 ANKRD9Q96BM1 317 aaPredicted RBP15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 TRIM44Q96DX7 344 aaPredicted RBP15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 NSUN5Q96P11 429 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 PAFAH2Q99487 392 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 VPS11Q9H270 941 aa15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 CPSF2Q9P2I0 782 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 PPIEQ9UNP9 301 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-201ENST00000355572 MAST4O15021 2626 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 SCELO95171 688 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 TYK2P29597 1187 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 SERPINB8P50452 374 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 HSD17B7P56937 341 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 HSF1Q00613 529 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 OC90Q02509 493 aaPredicted RBP15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 SLC13A2Q13183 592 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 LAPTM5Q13571 262 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 DDX39BQ13838 428 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 MED27Q6P2C8 311 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 NCCRP1Q6ZVX7 275 aaPredicted RBP15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 MAMDC2Q7Z304 686 aaPredicted RBP15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 SIAH3Q8IW03 269 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 OR4N5Q8IXE1 308 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 CPSF7Q8N684 471 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 HUS1BQ8NHY5 278 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 PTPMT1Q8WUK0 201 aaPredicted RBP15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 SEC16BQ96JE7 1060 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 CDK15Q96Q40 435 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 MTERF1Q99551 399 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 TRIM45Q9H8W5 580 aaPredicted RBP15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 ZBTB26Q9HCK0 441 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 DMRT3Q9NQL9 472 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 LRFN1Q9P244 771 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 FBXW2Q9UKT8 454 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 RNF11Q9Y3C5 154 aa15.59■□□□□ 0.09
PDLIM7-201ENST00000355572 EXPH5Q8NEV8 1989 aa15.58■□□□□ 0.09
PDLIM7-201ENST00000355572 A0A1W2PS29 197 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 POC1B-GALNT4F8VUJ3 575 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 PLPP1O14494 284 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 OR7A17O14581 309 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 FGF17O60258 216 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 NME2P1O60361 137 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 SP1P08047 785 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 NME2P22392 152 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 NEK2P51955 445 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 HNRNPH2P55795 449 aaKnown RBP15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 RPS13P62277 151 aaKnown RBP15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 ACAP2Q15057 778 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 PCBP2Q15366 365 aaKnown RBP eCLIP15.58■□□□□ 0.082e-6■■■■□ 26.4
PDLIM7-201ENST00000355572 KHDRBS2Q5VWX1 349 aaKnown RBP15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 C18orf63Q68DL7 685 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 SLC25A25Q6KCM7 469 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 MDGA2Q7Z553 956 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 FGD2Q7Z6J4 655 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 ZNF595Q8IYB9 648 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 LGI4Q8N135 537 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms