RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 FADS2O95864 444 aaKnown RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 HRGP04196 525 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GRIK1P39086 918 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 TAF6P49848 677 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 SYPL1Q16563 259 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 THSD4Q6ZMP0 1018 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GALNT13Q8IUC8 556 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 STK40Q8N2I9 435 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 STPG2Q8N412 459 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 C17orf47Q8NEP4 570 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 OR10AC1Q8NH08 325 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 SH3KBP1Q96B97 665 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GRAMD1AQ96CP6 724 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CNTNAP3BQ96NU0 1288 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 PKP4Q99569 1192 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CNTNAP3Q9BZ76 1288 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 DUSP21Q9H596 190 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GPR27Q9NS67 375 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 ZSCAN32Q9NX65 697 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 TEX10Q9NXF1 929 aaPredicted RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 DTX4Q9Y2E6 619 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CLEC18AA5D8T8 446 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 LMX1BO60663 402 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 NGFRP08138 427 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 SLC6A11P48066 632 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 EFNA5P52803 228 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CTBP2P56545 445 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 BNC1Q01954 994 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 SLFN12LQ6IEE8 588 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 NOTUMQ6P988 496 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 DOK6Q6PKX4 331 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CLEC18BQ6UXF7 455 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 KIAA1324Q6UXG2 1013 aaKnown RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 ZNF836Q6ZNA1 936 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 NDUFAF7Q7L592 441 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GOLGA7Q7Z5G4 137 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 SIX5Q8N196 739 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CLEC18CQ8NCF0 446 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 LOXL4Q96JB6 756 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 RNF170Q96K19 258 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 MARCH2Q9P0N8 246 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 EIF3GO75821 320 aaKnown RBP eCLIP5.33□□□□□ -1.56
CD47-201ENST00000355354 HNRNPCP07910 306 aaKnown RBP eCLIP5.33□□□□□ -1.56
CD47-201ENST00000355354 C8orf89P0DMQ9 161 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 SLC7A1P30825 629 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 MC4RP32245 332 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 SUOXP51687 545 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 YWHAHQ04917 246 aaPredicted RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 C19orf57Q0VDD7 668 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 NAB1Q13506 487 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GPRC6AQ5T6X5 926 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 ZNF770Q6IQ21 691 aaPredicted RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 AAGABQ6PD74 315 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CERS6Q6ZMG9 384 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 UBE3DQ7Z6J8 389 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GTPBP3Q969Y2 492 aaKnown RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 TSSK2Q96PF2 358 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 MED10Q9BTT4 135 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GRIP1Q9Y3R0 1128 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 LOC100506127A0A0U1RQW1 187 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 WIPF3A6NGB9 483 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CHST10O43529 356 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GASTP01350 101 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 ST6GAL1P15907 406 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 SRP9P49458 86 aaKnown RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 SMARCB1Q12824 385 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 ZNF155Q12901 538 aaPredicted RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 TRIP4Q15650 581 aaPredicted RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 ATP6AP1Q15904 470 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 ZNF542PQ5EBM4 170 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 IL27RAQ6UWB1 636 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CYS1Q717R9 158 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 UMODL1-AS1Q8N2C9 162 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 FAM160A2Q8N612 972 aaPredicted RBP5.33□□□□□ -1.56
CD47-201ENST00000355354 LRRC52Q8N7C0 313 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 FAM46DQ8NEK8 389 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CDC26Q8NHZ8 85 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 ZNF599Q96NL3 588 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CGREF1Q99674 301 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 BFARQ9NZS9 450 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 RAI2Q9Y5P3 530 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 WNT6Q9Y6F9 365 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 GATBO75879 557 aaKnown RBP5.32□□□□□ -1.56
CD47-201ENST00000355354 TPGS2Q68CL5 300 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 TMEM53Q6P2H8 277 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 RFPL4BQ6ZWI9 263 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 ZZZ3Q8IYH5 903 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 CADM2Q8N3J6 435 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 ARL14Q8N4G2 192 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 PPP1R14CQ8TAE6 165 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 ROPN1LQ96C74 230 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 TBL1YQ9BQ87 522 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 NUSAP1Q9BXS6 441 aaKnown RBP5.32□□□□□ -1.56
CD47-201ENST00000355354 INSL5Q9Y5Q6 135 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 AZIN1O14977 448 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 SERPINA1P01009 418 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 CPMP14384 443 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 CSKP41240 450 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 CD151P48509 253 aa5.32□□□□□ -1.56
CD47-201ENST00000355354 TAS2R38P59533 333 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms