RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 HPRP00739 348 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 JUNDP17535 347 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 MRPS35P82673 323 aaKnown RBP16.35■□□□□ 0.21
VPS13B-201ENST00000355155 RGS1Q08116 209 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 SLC9A5Q14940 896 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 TRIM40Q6P9F5 258 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 ADCK2Q7Z695 626 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 AMIGO2Q86SJ2 522 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 GKN2Q86XP6 184 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 FAM160A2Q8N612 972 aaPredicted RBP16.35■□□□□ 0.21
VPS13B-201ENST00000355155 AMER3Q8N944 861 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 ACOT4Q8N9L9 421 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 SFXN5Q8TD22 340 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 RLN3Q8WXF3 142 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 SLC47A1Q96FL8 570 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 DPH2Q9BQC3 489 aaPredicted RBP16.35■□□□□ 0.21
VPS13B-201ENST00000355155 SLC35A5Q9BS91 424 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 RAB33BQ9H082 229 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 ERVMER34-1Q9H9K5 563 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 SLAMF7Q9NQ25 335 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 SPASTQ9UBP0 616 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 POMT2Q9UKY4 750 aa16.35■□□□□ 0.21
VPS13B-201ENST00000355155 C7orf72A4D263 438 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 CTSEP14091 401 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 TAF8Q7Z7C8 310 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 PLD3Q8IV08 490 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 CDC26Q8NHZ8 85 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 UTP15Q8TED0 518 aaKnown RBP16.34■□□□□ 0.21
VPS13B-201ENST00000355155 ZBED6CLQ96FA7 236 aaPredicted RBP16.34■□□□□ 0.21
VPS13B-201ENST00000355155 OSBPL10Q9BXB5 764 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 PIF1Q9H611 641 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 USE1Q9NZ43 259 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 ZNF451Q9Y4E5 1061 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 MAGEA13PA6NCF6 341 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 OR6C74A6NCV1 312 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 C1QCP02747 245 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 ARAFP10398 606 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 HOXB3P14651 431 aaPredicted RBP16.34■□□□□ 0.21
VPS13B-201ENST00000355155 SSR2P43308 183 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 NHSL2Q5HYW2 709 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 ENPP6Q6UWR7 440 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 ARHGEF39Q8N4T4 335 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 METTL25Q8N6Q8 603 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 SLC29A1Q99808 456 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 A4GALTQ9NPC4 353 aa16.34■□□□□ 0.21
VPS13B-201ENST00000355155 TEX10Q9NXF1 929 aaPredicted RBP16.34■□□□□ 0.21
VPS13B-201ENST00000355155 MDC1Q14676 2089 aaKnown RBP16.34■□□□□ 0.21
VPS13B-201ENST00000355155 AXIN1O15169 862 aa16.33■□□□□ 0.21
VPS13B-201ENST00000355155 PCBP3P57721 371 aaKnown RBP16.33■□□□□ 0.21
VPS13B-201ENST00000355155 LRRC36Q1X8D7 754 aa16.33■□□□□ 0.21
VPS13B-201ENST00000355155 ZNF630Q2M218 657 aaPredicted RBP16.33■□□□□ 0.21
VPS13B-201ENST00000355155 TJAP1Q5JTD0 557 aa16.33■□□□□ 0.21
VPS13B-201ENST00000355155 ZCCHC8Q6NZY4 707 aaKnown RBP16.33■□□□□ 0.21
VPS13B-201ENST00000355155 SVOPLQ8N434 492 aa16.33■□□□□ 0.21
VPS13B-201ENST00000355155 C11orf65Q8NCR3 313 aa16.33■□□□□ 0.21
VPS13B-201ENST00000355155 RDH12Q96NR8 316 aa16.33■□□□□ 0.21
VPS13B-201ENST00000355155 CXorf36Q9H7Y0 433 aa16.33■□□□□ 0.21
VPS13B-201ENST00000355155 EVA1BQ9NVM1 165 aa16.33■□□□□ 0.21
VPS13B-201ENST00000355155 TMEM229AB2RXF0 380 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 PROM1O43490 865 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 GCM2O75603 506 aaPredicted RBP16.33■□□□□ 0.2
VPS13B-201ENST00000355155 SERPINA1P01009 418 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 RPSAP08865 295 aaKnown RBP16.33■□□□□ 0.2
VPS13B-201ENST00000355155 TDGF1P13385 188 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 CXCL12P48061 93 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 MED21Q13503 144 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 CRB2Q5IJ48 1285 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 OOSP2Q86WS3 158 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 CHERPQ8IWX8 916 aaKnown RBP16.33■□□□□ 0.2
VPS13B-201ENST00000355155 FAM20CQ8IXL6 584 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 MMP21Q8N119 569 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 DEFB123Q8N688 67 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 FAM86B1Q8N7N1 296 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 CAMKVQ8NCB2 501 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 JPH3Q8WXH2 748 aaPredicted RBP16.33■□□□□ 0.2
VPS13B-201ENST00000355155 SERINC2Q96SA4 455 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 GABARAPL1Q9H0R8 117 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 SEMA6CQ9H3T2 930 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 THUMPD1Q9NXG2 353 aaKnown RBP16.33■□□□□ 0.2
VPS13B-201ENST00000355155 NTMQ9P121 344 aa16.33■□□□□ 0.2
VPS13B-201ENST00000355155 URADA6NGE7 173 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 SOCS2O14508 198 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 ZSCAN9O15535 394 aaPredicted RBP16.32■□□□□ 0.2
VPS13B-201ENST00000355155 ERI3O43414 337 aaKnown RBP16.32■□□□□ 0.2
VPS13B-201ENST00000355155 CTSVO60911 334 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 PRKD3O94806 890 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 LSSP48449 732 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 CRYBA2P53672 197 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 SLAMF1Q13291 335 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.32■□□□□ 0.2
VPS13B-201ENST00000355155 IQCCQ4KMZ1 466 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 GCNT6Q5T4J0 391 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 NDUFAF5Q5TEU4 345 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 SLC48A1Q6P1K1 146 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 UGT2A3Q6UWM9 527 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 ZBTB49Q6ZSB9 765 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 PPWD1Q96BP3 646 aaKnown RBP16.32■□□□□ 0.2
VPS13B-201ENST00000355155 MOAP1Q96BY2 351 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 ZFYVE21Q9BQ24 234 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 C17orf62Q9BQA9 187 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms