RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 NDNFQ8TB73 568 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 KCTD7Q96MP8 289 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 OR2S2Q9NQN1 319 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 R3HDM2Q9Y2K5 976 aaKnown RBP12.97□□□□□ -0.33
LMBR1-201ENST00000353442 REXO2Q9Y3B8 237 aaKnown RBP12.97□□□□□ -0.33
LMBR1-201ENST00000353442 MAN2B1O00754 1011 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 SNX3O60493 162 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 LILRB5O75023 590 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 SPATA31C1P0DKV0 1188 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 STOMP27105 288 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 SSX2Q16385 188 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 DEFB134Q4QY38 66 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 TMEM201Q5SNT2 666 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 C22orf39Q6P5X5 142 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 FIGNL1Q6PIW4 674 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 TM9SF3Q9HD45 589 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 PIAS3Q9Y6X2 628 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 ETV3P41162 512 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 TMEM107Q6UX40 140 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 TMIGD1Q6UXZ0 262 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 MAFIPQ8WZ33 124 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 DGCR14Q96DF8 476 aaKnown RBP12.97□□□□□ -0.33
LMBR1-201ENST00000353442 RAD9AQ99638 391 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 CXXC1Q9P0U4 656 aaPredicted RBP12.97□□□□□ -0.33
LMBR1-201ENST00000353442 DHDHQ9UQ10 334 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 UNC13BO14795 1591 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 ENTPD6O75354 484 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 TRMUO75648 421 aaKnown RBP12.97□□□□□ -0.33
LMBR1-201ENST00000353442 PRKD3O94806 890 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 MAOBP27338 520 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 STK19P49842 368 aaPredicted RBP12.97□□□□□ -0.33
LMBR1-201ENST00000353442 ZNF136P52737 540 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 PSMA6P60900 246 aaKnown RBP12.97□□□□□ -0.33
LMBR1-201ENST00000353442 ST3GAL3Q11203 375 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 TICAM1Q8IUC6 712 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 NANOS1Q8WY41 292 aaKnown RBP12.97□□□□□ -0.33
LMBR1-201ENST00000353442 MYRFLQ96LU7 910 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 FAM83CQ9BQN1 747 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 LRRC19Q9H756 370 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 SFXN1Q9H9B4 322 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 MRPL15Q9P015 296 aaKnown RBP12.97□□□□□ -0.33
LMBR1-201ENST00000353442 PDE10AQ9Y233 779 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 CROCC2H7BZ55 1655 aa12.97□□□□□ -0.33
LMBR1-201ENST00000353442 MEGF6O75095 1541 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 SRPRAP08240 638 aaKnown RBP12.96□□□□□ -0.33
LMBR1-201ENST00000353442 PTAFRP25105 342 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 PTPRCAPQ14761 206 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 SEC23BQ15437 767 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 CCDC58Q4VC31 144 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 SLX4IPQ5VYV7 408 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 WDR92Q96MX6 357 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 ANKRD27Q96NW4 1050 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 ITM2CQ9NQX7 267 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 GDF1P27539 372 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 FBXL22Q6P050 247 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 PROKR1Q8TCW9 393 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 RNF186Q9NXI6 227 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 ATPIF1Q9UII2 106 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 RNF215Q9Y6U7 377 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 PLSCR5A0PG75 271 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 OR12D1P0DN82 309 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 TIMP2P16035 220 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 TPSB2P20231 275 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 RPL5P46777 297 aaKnown RBP12.96□□□□□ -0.33
LMBR1-201ENST00000353442 TMEM115Q12893 351 aaPredicted RBP12.96□□□□□ -0.33
LMBR1-201ENST00000353442 TPSAB1Q15661 275 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 CDONQ4KMG0 1287 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 SWT1Q5T5J6 900 aaKnown RBP12.96□□□□□ -0.33
LMBR1-201ENST00000353442 OR56B2PQ8NGI1 322 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 S100A14Q9HCY8 104 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 RRP8O43159 456 aaKnown RBP12.96□□□□□ -0.33
LMBR1-201ENST00000353442 RFPL2O75678 378 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 GTF2F2P13984 249 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 ZNF28P17035 718 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 HORMAD2Q8N7B1 307 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 OR9A1PQ8NGU1 263 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 LIPHQ8WWY8 451 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 STARD5Q9NSY2 213 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 PCTPQ9UKL6 214 aa12.96□□□□□ -0.33
LMBR1-201ENST00000353442 MYO3AQ8NEV4 1616 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 MATN2O00339 956 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 HCRTO43612 131 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 ZIC2O95409 532 aaPredicted RBP12.96□□□□□ -0.34
LMBR1-201ENST00000353442 USP43Q70EL4 1123 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 RPS27LQ71UM5 84 aaKnown RBP12.96□□□□□ -0.34
LMBR1-201ENST00000353442 SLC30A8Q8IWU4 369 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 PEX13Q92968 403 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 HSPA12BQ96MM6 686 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 L2HGDHQ9H9P8 463 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 RNF11Q9Y3C5 154 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 HTR3BO95264 441 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 LUMP51884 338 aaPredicted RBP12.96□□□□□ -0.34
LMBR1-201ENST00000353442 FGL1Q08830 312 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 DYRK1AQ13627 763 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 SLC14A2Q15849 920 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 ASPGQ86U10 573 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 PISDQ9UG56 409 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 ARHGEF5Q12774 1597 aa12.96□□□□□ -0.34
LMBR1-201ENST00000353442 PROM1O43490 865 aa12.95□□□□□ -0.34
LMBR1-201ENST00000353442 PRKCAP17252 672 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms