RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PSMD12O00232 456 aaPredicted RBP17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 PLD2O14939 933 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 CHST10O43529 356 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 ARSFP54793 590 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 STX1BP61266 288 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 C2orf80Q0P641 193 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 AGKQ53H12 422 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 YOD1Q5VVQ6 348 aaPredicted RBP17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 ANKRD26P1Q6NSI1 321 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 RHBDD2Q6NTF9 364 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 GK5Q6ZS86 529 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 BPHLQ86WA6 291 aaPredicted RBP17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 PARP9Q8IXQ6 854 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 TMEM52Q8NDY8 209 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 LRRC37BQ96QE4 947 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 DPY30Q9C005 99 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 SLC22A11Q9NSA0 550 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 ZIM2Q9NZV7 527 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 DAPP1Q9UN19 280 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 PCDHB3Q9Y5E6 796 aa17.96■□□□□ 0.47
CHMP4A-201ENST00000347519 A0A088AWK7 358 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 A0A1B0GX78 115 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 CAPN14A8MX76 684 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 C9orf172C9J069 976 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 FAM227AF5H4B4 570 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 PROM1O43490 865 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 SLC22A3O75751 556 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 AIFM1O95831 613 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 JMJD7P0C870 316 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 ZNF10P21506 573 aaPredicted RBP17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 AVPR1BP47901 424 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 HNRNPFP52597 415 aaKnown RBP17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 TRA2BP62995 288 aaKnown RBP17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 KLC1Q07866 573 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 UGT8Q16880 541 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 ZNF385CQ66K41 422 aaPredicted RBP17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 C6orf89Q6UWU4 347 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 GPR180Q86V85 440 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 EFCAB3Q8N7B9 438 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 WDR36Q8NI36 951 aaKnown RBP17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 GBP5Q96PP8 586 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 NPLQ9BXD5 320 aaPredicted RBP17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 LYRM4Q9HD34 91 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 LYARQ9NX58 379 aaKnown RBP17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 CCDC167Q9P0B6 97 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 SRPK3Q9UPE1 567 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 SEC16AO15027 2179 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 CROCCQ5TZA2 2017 aa17.95■□□□□ 0.46
CHMP4A-201ENST00000347519 KNTC1P50748 2209 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 H0YIG0 161 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 PGRMC2O15173 223 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 KIAA0754O94854 1291 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 FURINP09958 794 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 PIM1P11309 404 aaPredicted RBP17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 JAK1P23458 1154 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 RORAP35398 523 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 ASMTP46597 345 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 SHC2P98077 582 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 EIF3IQ13347 325 aaKnown RBP17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 ZNF385BQ569K4 471 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 NDUFAF5Q5TEU4 345 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 LCN10Q6JVE6 187 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 COX15Q7KZN9 410 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 TMPRSS7Q7RTY8 843 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 TRPM8Q7Z2W7 1104 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 TMEM132CQ8N3T6 1108 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 FAM47BQ8NA70 645 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 OR7A2PQ8NGA2 310 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 CLIP3Q96DZ5 547 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 MVB12AQ96EY5 273 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 TAAR9Q96RI9 348 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 RBCK1Q9BYM8 510 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 SLC7A5P2Q9GIP4 190 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 CLMPQ9H6B4 373 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 AKIRIN1Q9H9L7 192 aaPredicted RBP17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 SLC52A3Q9NQ40 469 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 TXLNGQ9NUQ3 528 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 ARL8BQ9NVJ2 186 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 C5AR2Q9P296 337 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 CAPN7Q9Y6W3 813 aa17.94■□□□□ 0.46
CHMP4A-201ENST00000347519 TEX51A0A1B0GUA7 166 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 MED19A0JLT2 244 aaPredicted RBP17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 GLOD5A6NK44 160 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 CCT8L1PA6NM43 557 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 GABRR3A8MPY1 467 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 CYR61O00622 381 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 SCAMP2O15127 329 aaKnown RBP17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 DGKQP52824 942 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 RAB38P57729 211 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 C21orf58P58505 322 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 PHC1P78364 1004 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 TNFRSF17Q02223 184 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 ERV3-1Q14264 604 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 DCAF12Q5T6F0 453 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 FAM91A1Q658Y4 838 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 CYB5D1Q6P9G0 228 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 CEACAM20Q6UY09 585 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 TMEM151BQ8IW70 566 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 POU5F2Q8N7G0 328 aa17.93■□□□□ 0.46
CHMP4A-201ENST00000347519 PEX11GQ96HA9 241 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms