RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ARL10Q8N8L6 244 aa20.38■□□□□ 0.85
TSPAN3-202ENST00000346495 TMEM105Q8N8V8 129 aa20.38■□□□□ 0.85
TSPAN3-202ENST00000346495 C19orf47Q8N9M1 422 aaKnown RBP20.38■□□□□ 0.85
TSPAN3-202ENST00000346495 ZFP90Q8TF47 636 aa20.38■□□□□ 0.85
TSPAN3-202ENST00000346495 OR5P2Q8WZ92 322 aa20.38■□□□□ 0.85
TSPAN3-202ENST00000346495 DHRS12A0PJE2 317 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 UMPSP11172 480 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 ZNF10P21506 573 aaPredicted RBP20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 PSMA4P25789 261 aaKnown RBP20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 SHBQ15464 509 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 SLCO4A1Q96BD0 722 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 SERINC2Q96SA4 455 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 TACO1Q9BSH4 297 aaKnown RBP20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 SPATA9Q9BWV2 254 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 NLNQ9BYT8 704 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 RAB33BQ9H082 229 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 GORASP2Q9H8Y8 452 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 IL21RQ9HBE5 538 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 CCM2LQ9NUG4 571 aaPredicted RBP20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 LRIT1Q9P2V4 623 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 RNF215Q9Y6U7 377 aa20.37■□□□□ 0.85
TSPAN3-202ENST00000346495 TCRBV5S2A0A599 114 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 FRKP42685 505 aaPredicted RBP20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 PPM1FP49593 454 aaPredicted RBP20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 SLC14A1Q13336 389 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 GAB1Q13480 694 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 CYP51A1Q16850 503 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 ZC3H12BQ5HYM0 836 aaKnown RBP20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 TMEM126BQ8IUX1 230 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 ZCCHC10Q8TBK6 192 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 CANT1Q8WVQ1 401 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 PIGKQ92643 395 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 EXOSC8Q96B26 276 aaKnown RBP20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 ZC3H10Q96K80 434 aaKnown RBP20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 CCDC3Q9BQI4 270 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 RPF2Q9H7B2 306 aaKnown RBP20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 ARMC1Q9NVT9 282 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 FBXW2Q9UKT8 454 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 KNL1Q8NG31 2342 aa20.36■□□□□ 0.85
TSPAN3-202ENST00000346495 A0A1W2PR48 441 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 SLC9B1P1A6NJY1 282 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 NUDT21O43809 227 aaKnown RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 EIF2S1P05198 315 aaKnown RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 IL10P22301 178 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 CNR2P34972 360 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 PCBP4P57723 403 aaKnown RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 CPZQ66K79 652 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 ERICH5Q6P6B1 374 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 CEP68Q76N32 757 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 C10orf111Q8N326 155 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 CSNK1A1LQ8N752 337 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 OR52E4Q8NGH9 312 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 FIG4Q92562 907 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 ZBED6CLQ96FA7 236 aaPredicted RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 TCTN2Q96GX1 697 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 SLC35A5Q9BS91 424 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 VCX3BQ9H321 246 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 EPB41L1Q9H4G0 881 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 ACSS1Q9NUB1 689 aaPredicted RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 EPHA6Q9UF33 1036 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 ATG4BQ9Y4P1 393 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 NUP214P35658 2090 aaPredicted RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 CXCR6O00574 342 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 CASQ2O14958 399 aaPredicted RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 SH3BP5O60239 455 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 GIMD1P0DJR0 217 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 MANFP55145 182 aaKnown RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 MLC1Q15049 377 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 PEAR1Q5VY43 1037 aaPredicted RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 ZNF551Q7Z340 670 aaPredicted RBP20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 DGLUCYQ7Z3D6 616 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 SLC35F3Q8IY50 421 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 ADGRG5Q8IZF4 528 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 MAP3K3Q99759 626 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 RAD21L1Q9H4I0 556 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 NEUROD4Q9HD90 331 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 FAM60AQ9NP50 221 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 PHF11Q9UIL8 331 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 RIMS3Q9UJD0 308 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 ANAPC2Q9UJX6 822 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 UTS2RQ9UKP6 389 aa20.35■□□□□ 0.85
TSPAN3-202ENST00000346495 A0A1B0GTQ1 180 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 PROM1O43490 865 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 B3GALT2O43825 422 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 AIFM1O95831 613 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 GLB1P16278 677 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 ALOX12P18054 663 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 UQCRC2P22695 453 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 EPHA8P29322 1005 aaPredicted RBP20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 VSX2P58304 361 aaPredicted RBP20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 TMEM214Q6NUQ4 689 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 ZCCHC8Q6NZY4 707 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 FAM92BQ6ZTR7 304 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 PNPT1Q8TCS8 783 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 POP5Q969H6 163 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 ZDHHC12Q96GR4 267 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 AHCYL2Q96HN2 611 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 CD180Q99467 661 aa20.34■□□□□ 0.85
TSPAN3-202ENST00000346495 PKP2Q99959 881 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms