RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 PRKCQQ04759 706 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 ZNF763Q0D2J5 394 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 NRF1Q16656 503 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 PRSS53Q2L4Q9 553 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 FAAH2Q6GMR7 532 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 ADCK2Q7Z695 626 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 MICU2Q8IYU8 434 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 MMP21Q8N119 569 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 CLEC4FQ8N1N0 589 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 RAB42Q8N4Z0 105 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 FAM86B1Q8N7N1 296 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 OR4K1Q8NGD4 311 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 OR2A1Q8NGT9 310 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 OR2L8Q8NGY9 312 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 SNX19Q92543 992 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 COQ8BQ96D53 544 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 FAM120BQ96EK7 910 aaKnown RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 F2RL3Q96RI0 385 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 CIB1Q99828 191 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 MVB12BQ9H7P6 319 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 SLC2A4RGQ9NR83 387 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 AGPAT4Q9NRZ5 378 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 TBCCD1Q9NVR7 557 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 FAM120CQ9NX05 1096 aaKnown RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 SIRT5Q9NXA8 310 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 SPHK1Q9NYA1 384 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 USP36Q9P275 1121 aaKnown RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 CA14Q9ULX7 337 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 TSC22D4Q9Y3Q8 395 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 COMMD3-BMI1R4GMX3 469 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 VCANP13611 3396 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 LOC100289279A0A1B0GTE1 492 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 TMEM247A6NEH6 219 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 ANKDD1BA6NHY2 528 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 FAM220BPB1ANY3 271 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 CXCR6O00574 342 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 PLPP1O14494 284 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 OR1F1O43749 312 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 APBB3O95704 486 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 STATHP02808 62 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 IGHV4-34P06331 123 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 UMPSP11172 480 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 ENGP17813 658 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 FASP25445 335 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 HTR1BP28222 390 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 PEBP1P30086 187 aaKnown RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 CSNK1G2P78368 415 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 PRDX1Q06830 199 aaKnown RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 C2orf80Q0P641 193 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 TDGQ13569 410 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 MAP7Q14244 749 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 ENPP6Q6UWR7 440 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 Q6ZSR6 202 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 NANOGNBQ7Z5D8 188 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 SLC9B2Q86UD5 537 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 LILRB2Q8N423 598 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 ANKFN1Q8N957 763 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 TMEM145Q8NBT3 493 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 PAPD5Q8NDF8 572 aaKnown RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 PNPT1Q8TCS8 783 aaKnown RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 GATA6Q92908 595 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 CIDECQ96AQ7 238 aaPredicted RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 TOE1Q96GM8 510 aaKnown RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 RNF145Q96MT1 663 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 BTBD9Q96Q07 612 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 MS4A8Q9BY19 250 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 ZNF717Q9BY31 904 aaPredicted RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 REEP4Q9H6H4 257 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 SOX17Q9H6I2 414 aaPredicted RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 FAM86C1Q9NVL1 165 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 ADGRE2Q9UHX3 823 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 C7orf72A4D263 438 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 C10orf142B7Z368 130 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 CLIC1O00299 241 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 SOCS2O14508 198 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 PRICKLE3O43900 615 aaPredicted RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 GMNNO75496 209 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 IL3P08700 152 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 FURINP09958 794 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 CXCR2P25025 360 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 AKT2P31751 481 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 ACTR1BP42025 376 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 HNRNPFP52597 415 aaKnown RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 SRP54P61011 504 aaKnown RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 ACTR1AP61163 376 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 SMAD2Q15796 467 aaKnown RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 NKG7Q16617 165 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 ALG11Q2TAA5 492 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 C6orf52Q5T4I8 152 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 DEPDC1Q5TB30 811 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 KHDRBS2Q5VWX1 349 aaKnown RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 FAM71E1Q6IPT2 247 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 CAMKMTQ7Z624 323 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 EPHX4Q8IUS5 362 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 SLC22A18ASQ8N1D0 253 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 FBXL6Q8N531 539 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 FBXO30Q8TB52 745 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 NETO1Q8TDF5 533 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 UBASH3BQ8TF42 649 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 STARD8Q92502 1023 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms