RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 KMOO15229 486 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 PRAMEF11O60813 436 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 GKN3PP0CG01 181 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 ZNF823P16415 610 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 RPL10P27635 214 aaKnown RBP17.41■□□□□ 0.38
SMC4-201ENST00000344722 CLDN10P78369 228 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 GSTM4Q03013 218 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 CEACAM19Q7Z692 300 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 TMCO2Q7Z6W1 182 aaPredicted RBP17.41■□□□□ 0.38
SMC4-201ENST00000344722 OR10G6Q8NH81 332 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 NEK7Q8TDX7 302 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 CCDC120Q96HB5 630 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 PFDN5Q99471 154 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 CCM2Q9BSQ5 444 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 PHPT1Q9NRX4 125 aaPredicted RBP17.41■□□□□ 0.38
SMC4-201ENST00000344722 KAT6AQ92794 2004 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 FAM72CH0Y354 149 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 RBBP9O75884 186 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 ATP1B2P14415 290 aaPredicted RBP17.4■□□□□ 0.38
SMC4-201ENST00000344722 AMD1P17707 334 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 RPS13P62277 151 aaKnown RBP17.4■□□□□ 0.38
SMC4-201ENST00000344722 RPL19P84098 196 aaKnown RBP17.4■□□□□ 0.38
SMC4-201ENST00000344722 CREB5Q02930 508 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 MAP2K5Q13163 448 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 FAM72AQ5TYM5 149 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 LIPJQ5W064 366 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 FAM72DQ6L9T8 149 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 FAM72BQ86X60 149 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 C2orf15Q8WU43 125 aaKnown RBP17.4■□□□□ 0.38
SMC4-201ENST00000344722 GTF2H4Q92759 462 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 ARMC5Q96C12 935 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 NUBP2Q9Y5Y2 271 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 MYH3P11055 1940 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 GALEQ14376 348 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 FOXB2Q5VYV0 432 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 OR56A1Q8NGH5 318 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 C5orf34Q96MH7 638 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 SECISBP2Q96T21 854 aaKnown RBP17.4■□□□□ 0.38
SMC4-201ENST00000344722 OR51E2Q9H255 320 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 GORASP2Q9H8Y8 452 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 MYH7P12883 1935 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 BMP4P12644 408 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 S100A10P60903 97 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 PUM1Q14671 1186 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMC4-201ENST00000344722 PTPRCAPQ14761 206 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 UBXN11Q5T124 520 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 SNX18Q96RF0 628 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 SOHLH2Q9NX45 425 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 NDUFAF4Q9P032 175 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 SH2B3Q9UQQ2 575 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 KRT33AO76009 404 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 ADAP00813 363 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 ZNF26P17031 533 aaPredicted RBP17.4■□□□□ 0.38
SMC4-201ENST00000344722 VLDLRP98155 873 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 BCL7AQ4VC05 210 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 C7orf57Q8NEG2 295 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 PADI2Q9Y2J8 665 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 COLEC10Q9Y6Z7 277 aa17.4■□□□□ 0.38
SMC4-201ENST00000344722 SLC38A8A6NNN8 435 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 NARSO43776 548 aaKnown RBP17.39■□□□□ 0.38
SMC4-201ENST00000344722 DBIP07108 87 aaKnown RBP17.39■□□□□ 0.38
SMC4-201ENST00000344722 SPATA31D3P0C874 917 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 PCSK6P29122 969 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 GPR19Q15760 415 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 PRAMEF14Q5SWL7 426 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 PRAMEF13Q5VWM6 474 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 SPATA31D4Q6ZUB0 917 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 OSTM1Q86WC4 334 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 TICAM1Q8IUC6 712 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 HDDC3Q8N4P3 179 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 OR5H6Q8NGV6 325 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 ZNF514Q96K75 400 aaPredicted RBP17.39■□□□□ 0.38
SMC4-201ENST00000344722 PSKH2Q96QS6 385 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 ACOT13Q9NPJ3 140 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 TMEM5Q9Y2B1 443 aa17.39■□□□□ 0.38
SMC4-201ENST00000344722 A0A1B0GVC2 190 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 CD8B2A6NJW9 211 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 JRKO75564 520 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 PRNPP04156 253 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 CD8BP10966 210 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 HTR1BP28222 390 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 CYP27C1Q4G0S4 372 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 OR2T35Q8NGX2 323 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 BBS10Q8TAM1 723 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 EPYCQ99645 322 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 SMOQ99835 787 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.39■□□□□ 0.377e-12■■■■■ 38.5
SMC4-201ENST00000344722 PCTPQ9UKL6 214 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 UBR1Q8IWV7 1749 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 LOC100509620A0A075B734 347 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 CDK1P06493 297 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 PET100P0DJ07 73 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 ATXN7L3Q14CW9 347 aaPredicted RBP17.39■□□□□ 0.37
SMC4-201ENST00000344722 FAM189A2Q15884 450 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 TMEM69Q5SWH9 247 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 SLC5A8Q8N695 610 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 DCAF13Q9NV06 445 aaKnown RBP17.39■□□□□ 0.37
SMC4-201ENST00000344722 PADI3Q9ULW8 664 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 A8MU76 341 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 RPP14O95059 124 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms