RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TSPAN7P41732 249 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 KIR3DL1P43629 444 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 ZFP36L2P47974 494 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 FOXM1Q08050 763 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 C2orf80Q0P641 193 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 LRRC74AQ0VAA2 488 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 EIF3IQ13347 325 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 ISXQ2M1V0 245 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 CPTPQ5TA50 214 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 NDUFAF5Q5TEU4 345 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 PRMT9Q6P2P2 845 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 NATD1Q8N6N6 113 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 PCYOX1LQ8NBM8 494 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 PPCDCQ96CD2 204 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 FAM120CQ9NX05 1096 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 DAPP1Q9UN19 280 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 LOC100653049A0A140TA62 436 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 A0A1B0GX78 115 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 C1orf226A1L170 272 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 BLACEA4D250 179 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 EFCAB7A8K855 629 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 DSCR3O14972 297 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 AKAP10O43572 662 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 KRT34O76011 436 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 NR2F6P10588 404 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 FGF5P12034 268 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 IL12AP29459 219 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 HNRNPH2P55795 449 aaKnown RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 MC2RQ01718 297 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 TNFRSF17Q02223 184 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 UGT8Q16880 541 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 TIGD2Q4W5G0 525 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 LACTB2Q53H82 288 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 SPANXN4Q5MJ08 99 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 PDSS2Q86YH6 399 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 TMEM126BQ8IUX1 230 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 EFCAB3Q8N7B9 438 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 POU5F2Q8N7G0 328 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 BMPERQ8N8U9 685 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 OR9A4Q8NGU2 314 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 GFM2Q969S9 779 aaKnown RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 RTKNQ9BST9 563 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 RMND5AQ9H871 391 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 EFCAB1Q9HAE3 211 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 FBXO8Q9NRD0 319 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 TEX10Q9NXF1 929 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 TAS2R7Q9NYW3 318 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 LEF1Q9UJU2 399 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 NDUFAF1Q9Y375 327 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 ATG4BQ9Y4P1 393 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 NUP214P35658 2090 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 A0A0A6YYC8 382 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 I3L1I5 382 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 TM4SF5O14894 197 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 POLR1CO15160 346 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 ZNF749O43361 778 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 PROM1O43490 865 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 FOXS1O43638 330 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 GFRA3O60609 400 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 B3GALT4O96024 378 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 MT-CO3P00414 261 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 NPPAP01160 153 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 FTH1P19P0C7X4 201 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 T-ENOLP0DO92 83 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 RNH1P13489 461 aaKnown RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 CAPN3P20807 821 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 LIM2P55344 173 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 RAB15P59190 212 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 MMEL1Q495T6 779 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 ANXA8L1Q5VT79 327 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 RHBDD2Q6NTF9 364 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 PRSS41Q7RTY9 318 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 KIAA2013Q8IYS2 634 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 CACTIN-AS1Q8N1I8 211 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 AMER3Q8N944 861 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 VPS37AQ8NEZ2 397 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 DNAJB8Q8NHS0 232 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 COQ8BQ96D53 544 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 OR52E6Q96RD3 313 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 BHLHE41Q9C0J9 482 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 SLC7A5P2Q9GIP4 190 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 SLC52A3Q9NQ40 469 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 NDE1Q9NXR1 346 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 KCMF1Q9P0J7 381 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 CLCA2Q9UQC9 943 aa13.75□□□□□ -0.21
NIPAL3-202ENST00000339255 NUP210LQ5VU65 1888 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 SCN2AQ99250 2005 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 GABRR3A8MPY1 467 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 SGK494L7N484 410 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 SLC30A4O14863 429 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 CSO75390 466 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 RDH16O75452 317 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 SCRG1O75711 98 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 AIFM1O95831 613 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 CPN2P22792 545 aa13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 SIM1P81133 766 aaPredicted RBP13.74□□□□□ -0.21
NIPAL3-202ENST00000339255 ACTN3Q08043 901 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms