RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PPP1CAP62136 330 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 VAC14Q08AM6 782 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 SPIDRQ14159 915 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 OTUD3Q5T2D3 398 aaPredicted RBP21.31■■□□□ 1
PDLIM2-203ENST00000339162 TMTC4Q5T4D3 741 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 ERICH5Q6P6B1 374 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 ZNF438Q7Z4V0 828 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 ADHFE1Q8IWW8 467 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 TMBIM1Q969X1 311 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 KCNC2Q96PR1 638 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 HRASLS2Q9NWW9 162 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 CORO2BQ9UQ03 480 aa21.31■■□□□ 1
PDLIM2-203ENST00000339162 DLGAP1O14490 977 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 DEAF1O75398 565 aaPredicted RBP21.3■■□□□ 1
PDLIM2-203ENST00000339162 DCNP07585 359 aaKnown RBP21.3■■□□□ 1
PDLIM2-203ENST00000339162 ATP5A1P25705 553 aaKnown RBP21.3■■□□□ 1
PDLIM2-203ENST00000339162 CD27P26842 260 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 PTGER1P34995 402 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 MRPS35P82673 323 aaKnown RBP21.3■■□□□ 1
PDLIM2-203ENST00000339162 SLC9A5Q14940 896 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 FCRL6Q6DN72 434 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 TRIM40Q6P9F5 258 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 SPRED1Q7Z699 444 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 VTCN1Q7Z7D3 282 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 MARVELD2Q8N4S9 558 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 MAGEE2Q8TD90 523 aaPredicted RBP21.3■■□□□ 1
PDLIM2-203ENST00000339162 TRAPPC9Q96Q05 1148 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 BATF3Q9NR55 127 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 EVA1BQ9NVM1 165 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 ATG4BQ9Y4P1 393 aa21.3■■□□□ 1
PDLIM2-203ENST00000339162 OR2A25A4D2G3 310 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 TYRP1P17643 537 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 CD38P28907 300 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 BLKP51451 505 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 UGT2A3Q6UWM9 527 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 ZDHHC1Q8WTX9 485 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 WBP11Q9Y2W2 641 aaKnown RBP21.29■■□□□ 1
PDLIM2-203ENST00000339162 KIR2DS5A0A0G2JLQ3 304 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 A0A0G2JNG1 304 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 H0YJX3 145 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 KIR2DS3K7RE56 304 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 RASAL1O95294 804 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 NUDT1P36639 197 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 RPS15AP62244 130 aaKnown RBP21.29■■□□□ 1
PDLIM2-203ENST00000339162 RPS26P62854 115 aaKnown RBP21.29■■□□□ 1
PDLIM2-203ENST00000339162 HHEXQ03014 270 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 KIR2DS5Q14953 304 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 NHSL2Q5HYW2 709 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 FIGLAQ6QHK4 219 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 OR52N2Q8NGI0 321 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 OLAHQ9NV23 265 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 SAMD4AQ9UPU9 718 aaKnown RBP21.29■■□□□ 1
PDLIM2-203ENST00000339162 GMEB1Q9Y692 573 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 SCN3AQ9NY46 2000 aa21.29■■□□□ 1
PDLIM2-203ENST00000339162 A0A1W2PR48 441 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 PGRMC2O15173 223 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 KIF1CO43896 1103 aaKnown RBP21.28■■□□□ 1
PDLIM2-203ENST00000339162 SH3BP5O60239 455 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 CRYBA2P53672 197 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 PCBP4P57723 403 aaKnown RBP21.28■■□□□ 1
PDLIM2-203ENST00000339162 BTN3A2P78410 334 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 C18orf63Q68DL7 685 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 HS3ST5Q8IZT8 346 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 HSPA12BQ96MM6 686 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 NELL2Q99435 816 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 OSBPL11Q9BXB4 747 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 SCOCQ9UIL1 159 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 ASB4Q9Y574 426 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 LOC105369274A0A096LPK9 316 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 LOC102723532A0A0G2JNH3 316 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 PLOD2O00469 737 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 GNGT2O14610 69 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 P2RX6O15547 441 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 TNFRSF21O75509 655 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 GSTM2P28161 218 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 CDK9P50750 372 aaKnown RBP21.28■■□□□ 1
PDLIM2-203ENST00000339162 ZNF750Q32MQ0 723 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 FRMPD2BQ6IN97 320 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 ASPGQ86U10 573 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 OR4N4Q8N0Y3 316 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 SPEM1Q8N4L4 309 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 C11orf65Q8NCR3 313 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 ZCCHC10Q8TBK6 192 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 TPD52L3Q96J77 140 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 OR2A5Q96R48 311 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 U3KQV3 271 aa21.28■■□□□ 1
PDLIM2-203ENST00000339162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 A0A1W2PR77 199 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 OR5K4A6NMS3 321 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 GCM2O75603 506 aaPredicted RBP21.27■■□□□ 1
PDLIM2-203ENST00000339162 ERAL1O75616 437 aaKnown RBP21.27■■□□□ 1
PDLIM2-203ENST00000339162 ZNF888P0CJ79 500 aaPredicted RBP21.27■■□□□ 1
PDLIM2-203ENST00000339162 NELFEP18615 380 aaKnown RBP21.27■■□□□ 1
PDLIM2-203ENST00000339162 PRIM2P49643 509 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 MAZP56270 477 aaKnown RBP21.27■■□□□ 1
PDLIM2-203ENST00000339162 STXBP1P61764 594 aaKnown RBP21.27■■□□□ 1
PDLIM2-203ENST00000339162 VEZF1Q14119 521 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 SPESP1Q6UW49 350 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 TMEFF1Q8IYR6 380 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 MFSD2AQ8NA29 543 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms